Transcript Information: S_Transcript_39886.p1


Annotated TAIR IDAT5G22920.1
Annotated Gene NameCHY-type/CTCHY-type/RING-type Zinc finger protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:7665143-7667031 | Forward length=291
E-Value3.8E-79
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 21.0443924050895
Replicate 30.32738584763788
Condition 2: 8 Hour
Replicate 10.37855722456449
Replicate 20.7942668156116
Replicate 31.5135513092294
Condition 3: 24 Hour
Replicate 10.51703866249927
Replicate 20.40231618182865
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39886.p1 GENE.S_Transcript_39886~~S_Transcript_39886.p1 ORF type:complete len:169 (+),score=26.36,zf-CHY|PF05495.8|8.3e-21,zf-CHY|PF05495.8|2e+02 S_Transcript_39886:227-733(+)
ATGAGTTGTGGGTGTGAGACCCAATTGGCCTCCATCAATGGCTCAGAACAATTCTTCAAATCTTCAATTGATTTCATGGAGCTTTCAGCTGGGAATTATGGATGCAAGCACTATAGGAGGAGGTGTAAGATTAGAGCACCCTGTTGTAATGAGATATTTGATTGTAGACATTGTCATAATGAAGCCAAGAATTCTCTTGAAATTGATCCTTTGGACCGACATGATATTCCACGCCATGATATTAAAAAGGTGATATGCTCCCTCTGTGGTGAAGAACAAGATGTTCAACAGAACTGCGTCAAGTGTGGGGTTTGCATGGGGAAGTACTTCTGTGCAGTCTGCAATTTCTTTGATGAAGATGTTTCAAAGAAACAGTATCATTGTCATGACTGTGGAATATGCAGGACTGGAGGCGAAGAGAATTTCTTCCATTGTTCATCTTGTGGTAAGATTATAGATCCTTTTTTCAGATACACCATCTTACTCTTCGTGTCATTTCTGAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39886.p1 GENE.S_Transcript_39886~~S_Transcript_39886.p1 ORF type:complete len:169 (+),score=26.36,zf-CHY|PF05495.8|8.3e-21,zf-CHY|PF05495.8|2e+02 S_Transcript_39886:227-733(+)
MSCGCETQLASINGSEQFFKSSIDFMELSAGNYGCKHYRRRCKIRAPCCNEIFDCRHCHNEAKNSLEIDPLDRHDIPRHDIKKVICSLCGEEQDVQQNCVKCGVCMGKYFCAVCNFFDEDVSKKQYHCHDCGICRTGGEENFFHCSSCGKIIDPFFRYTILLFVSFLR*

Click here to download the sequence:
Link to NCBI Protein BLAST