Transcript Information: S_Transcript_398888.p1


Annotated TAIR IDAT3G25270.1
Annotated Gene NameRibonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9203934-9204965 | Reverse length=343
E-Value6E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.10235769705839
Replicate 20.33942753165407
Replicate 30.070933600321541
Condition 2: 8 Hour
Replicate 10.41010365994486
Replicate 20.086045571691256
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.087168506062875
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_398888.p1 GENE.S_Transcript_398888~~S_Transcript_398888.p1 ORF type:3prime_partial len:260 (+),score=14.80,zf-RVT|PF13966.2|7.2e-17 S_Transcript_398888:36-812(+)
ATGTGGCATCGAGTTGTGAGGAGTAGGTACGGAATTTCTAACGGGTGGGATGCTATTGCTGCAGTGGGTTCTACACATTCTTCTCTATGGAAGTTTGTCTCTCAAGTCGCAGGTTCCTTTATGGTTTTGGTGTATGTGCGTCTAGGGGCGGGCCACCGAATTAGATTCTGGGAAGATGTGTGGTGTGATGGACAATCTTTACGGGAGCGGTTACCGAGATTGTATTCATTATCCACTCTTCATGAGGCGCCTGTTGCTCAGTTTTACTCCAACGGCTCACGTTCGTGGGATCTTCACTTCAGACGCCCAGTGTTGGACAGGGAGGTCGACGATCTAGTTGTTTTGCTTGCCATTCTTGAATCCTCTACCTTTGGGGATGGAGACGATAGACGCGTTTGGAAAGGGGATTCTACAGGAACGTTCTCTTGTAGGTCTTTCTTACGCTGTCTTGGAAGTAGCGGGCCGAGCAACTTTCCGTTGGGTGGGATGATTTGGAAGGCAAAGGTTCCCCCTAAGGTTCGGGATTTCACTTGGACCCTGGTCTTAGGGAAACTTAATACTAACGACATGCTGCAGAGGCGGAGACCGGGGTGTTGTCTCTCCCCTGATGTTTGCGCTATGTGTGGTGAAAGTGGAGAGTCAACAGCTCACTTATTTTTGCATTGCAAGGCGGCGCAGAGTTTATGGCGAAGGCTCTTTGGAGTGAAGATGGAGGTGACGGTAGCGGCAACACGTAACCCACAAGAGAGGAATACAAGGTTGGAAAATTTGTGCTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_398888.p1 GENE.S_Transcript_398888~~S_Transcript_398888.p1 ORF type:3prime_partial len:260 (+),score=14.80,zf-RVT|PF13966.2|7.2e-17 S_Transcript_398888:36-812(+)
MWHRVVRSRYGISNGWDAIAAVGSTHSSLWKFVSQVAGSFMVLVYVRLGAGHRIRFWEDVWCDGQSLRERLPRLYSLSTLHEAPVAQFYSNGSRSWDLHFRRPVLDREVDDLVVLLAILESSTFGDGDDRRVWKGDSTGTFSCRSFLRCLGSSGPSNFPLGGMIWKAKVPPKVRDFTWTLVLGKLNTNDMLQRRRPGCCLSPDVCAMCGESGESTAHLFLHCKAAQSLWRRLFGVKMEVTVAATRNPQERNTRLENLCW

Click here to download the sequence:
Link to NCBI Protein BLAST