Transcript Information: S_Transcript_398935.p1


Annotated TAIR IDAT5G58610.1
Annotated Gene NamePHD finger transcription factor, putative
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23686771-23691053 | Reverse length=1065
E-Value6.8E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.0546432551945
Replicate 23.9884676774455
Replicate 33.5450568215617
Condition 2: 8 Hour
Replicate 17.4663265870054
Replicate 27.7815125703397
Replicate 38.9750937284132
Condition 3: 24 Hour
Replicate 13.1992506713914
Replicate 24.252706062381
Replicate 33.7515626689532


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_398935.p1 GENE.S_Transcript_398935~~S_Transcript_398935.p1 ORF type:5prime_partial len:437 (+),score=84.02,PHD|PF00628.25|3.2e-07,PHD|PF00628.25|0.0026 S_Transcript_398935:1-1311(+)
GGAAAATTAATTTTATGTGATAAGTGTCCGTCCTCATTTCATGCAAACTGCCTCAATCTGCAGAAAATTCCTGAAGGTGATTGGTTCTGTCCGTCATGCTGTTGTGCCATTTGTGGTGAAAGCCAATATGATGTCAGTATGGAATTTACTGGGACAAGTGTCCTCTCTTGCCAGCAATGTGAGAGGCAATATCATGCTCAATGTATAAGAGACCGGGAAATGATTAAGTTGGATGTTCGTCCTATGGAAAATTGGTTTTGCTGTAAAATGTGTGAAAAGGTACACTGGGGTCTCCAGCAGCTTCTTGACAAACCCATTCTTGTTGGTCAGAACAATTTGACCTGGACATTGATGAAACCAATGAACTATGACATCAGTGATCAAGATGATTGTGATATTGTCACCGTAGCAGACAATTATAGCAAGCTTAATGTTGCTCTTGAAGTGATGCATGAATGTTTTGAGCCTGTGAAAGAACCTCTGACAAGGCGAGATCTTGTTGAAGATGTTGTCTTCAGCAGAAGTTCTCATCTTAACAGACTAAACTTCAGAGGATTCTATACTGTGTTACTGGAAAGAAATGATGAGCTGATTAGTGTGGCTAATCTAAGGGTGTATGGAGACAAGGTTGCAGAAATTCCACTTGTTGGTACCCGATTTCAGCATCGTCGGCTTGGAATGTGTCGCGTCTTAATGAATGAGCTTGAGAAGAACCTCAAAAATCTAGGTGTAAACAGGCTGGTTCTTCCTGCAGCTGCAAGTGTTTTGAACACTTGGACTACTTCATTCGGGTTCTCACCAGTGACACAGTCAGATAGAGCTGAATTTCTTGGCTTCACCTTCTTAGAGTTTCAAGATACTGTTATGTGCCAAAAGCTCTTGAGGAAGCTCCCTTTGCTTCTACCACGCTTGTGGAGAGGTTCCCCTGGCATCCATTCTGAACCTCGTCAGAGTATTGAAGGACACAATAGCATCATGGATTTTGAGGGGAACAGCAGCATCTCTGAAGTTCATCAAGGGGAACAACAAGTTGGAGGGAGTGAAAGTGTAGATCAAGGACCACAAGTAATTGGCACTGAAAATAAACACGACAATGGCGGCAATGGTCTGGACTGCCCTGCTCCCATGGACACTGACTCAAGCAAGCAAGCAAGTGAACCATGCCACACCTTGGATTTGATCGATCAGAAGAAGGTGAACAGAGATAAATGTGATGGGACTCTGAAGTTTTACAAAAGAAAGAAAGCCACAGAGCTAAGACCTTCCATTACCCAAGCCGACTGCCCAAAACTCGAAGTTAGTTGTAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_398935.p1 GENE.S_Transcript_398935~~S_Transcript_398935.p1 ORF type:5prime_partial len:437 (+),score=84.02,PHD|PF00628.25|3.2e-07,PHD|PF00628.25|0.0026 S_Transcript_398935:1-1311(+)
GKLILCDKCPSSFHANCLNLQKIPEGDWFCPSCCCAICGESQYDVSMEFTGTSVLSCQQCERQYHAQCIRDREMIKLDVRPMENWFCCKMCEKVHWGLQQLLDKPILVGQNNLTWTLMKPMNYDISDQDDCDIVTVADNYSKLNVALEVMHECFEPVKEPLTRRDLVEDVVFSRSSHLNRLNFRGFYTVLLERNDELISVANLRVYGDKVAEIPLVGTRFQHRRLGMCRVLMNELEKNLKNLGVNRLVLPAAASVLNTWTTSFGFSPVTQSDRAEFLGFTFLEFQDTVMCQKLLRKLPLLLPRLWRGSPGIHSEPRQSIEGHNSIMDFEGNSSISEVHQGEQQVGGSESVDQGPQVIGTENKHDNGGNGLDCPAPMDTDSSKQASEPCHTLDLIDQKKVNRDKCDGTLKFYKRKKATELRPSITQADCPKLEVSCR*

Click here to download the sequence:
Link to NCBI Protein BLAST