Transcript Information: S_Transcript_398944.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.11465263611362
Replicate 20
Replicate 30.11460133120958
Condition 3: 24 Hour
Replicate 10.11744561016449
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_398944.p1 GENE.S_Transcript_398944~~S_Transcript_398944.p1 ORF type:internal len:186 (+),score=37.20,zf-RVT|PF13966.2|7.4e-10 S_Transcript_398944:3-557(+)
CATGCCTCCCCCTGGAAGTTCGTCTCCCAGGTGGCTGTTTTCTTCCTTCCTCTGGTGGGGTTGCATCTGGGTAAAGGGAGCAAGATTCGGTTTTGGGAGGATGTGTGGAGAGGTGATGTGTCTTTTATGGAGCGATTTCCCCGCGTTTATCGTCTCTCTACACTTCATGACGCTGCCATTGTCCGTTTCTTTGATGATGGGGCCTGGAACTTGCATTTGAGGAGGTCGATTAGAGATCTGGAAATGGATGAGTTGTCTACTCTTTTGGAAGTGCTGGATGGGGTGATGCTCTCTGACGTGGAGGATAGGCGAACTTGGAAAGCGGATCCTTCGGGGGTTTTCTCCTGTGCTTCTTTCCTGCGTTCCTTGCAAGGTCATATTGGAGGCTCCACCTTTCCCATTGCTCGGTTTTGGTGGAAGGCAAAAGCACCTTTCAAGGTGAGGGCTTTCATTTGGACCTTGGCCTTAGGAAAGATCAACACCAATGAAGTGCGGCAACATAGGCAGCCTCAGCCTGAAATGTGTCTCATGTGTCATAGGAGTGGGGAAACAACT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_398944.p1 GENE.S_Transcript_398944~~S_Transcript_398944.p1 ORF type:internal len:186 (+),score=37.20,zf-RVT|PF13966.2|7.4e-10 S_Transcript_398944:3-557(+)
HASPWKFVSQVAVFFLPLVGLHLGKGSKIRFWEDVWRGDVSFMERFPRVYRLSTLHDAAIVRFFDDGAWNLHLRRSIRDLEMDELSTLLEVLDGVMLSDVEDRRTWKADPSGVFSCASFLRSLQGHIGGSTFPIARFWWKAKAPFKVRAFIWTLALGKINTNEVRQHRQPQPEMCLMCHRSGETT

Click here to download the sequence:
Link to NCBI Protein BLAST