Transcript Information: S_Transcript_398947.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value0.0003
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14867598455408
Replicate 20
Replicate 30.10303204515978
Condition 2: 8 Hour
Replicate 10.23827251750987
Replicate 20
Replicate 30.23816589502773
Condition 3: 24 Hour
Replicate 10.12203845525472
Replicate 20
Replicate 30.14090527600624


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_398947.p1 GENE.S_Transcript_398947~~S_Transcript_398947.p1 ORF type:internal len:179 (+),score=35.69,zf-RVT|PF13966.2|7.5e-07 S_Transcript_398947:3-536(+)
CATGCCTCCCCCTGGAAGTTCGTCTCCCAGGTGGCTGTTTTCTTCCTTCCTCTGGTGGGGTTGCATCTGGGTAAAGGGAGCAAGATTCGGTTTTGGGAGGATGTGTGGAGAGGTGATGTGTCTTTTATGGAGCGATTTCCCCGCGTTTATCGTCTCTCTACACTTCATGACGCTGCCATTGTCCGTTTCTTTGATGATGGGGCCTGGAACTTGCATTTGAGGAGGTCGATTAGAGATCTGGAAATGGAAGAGTTGTCTACTTTGCTGGAAGTGTTGGATGGAGTGATGCTCTCTGACGTGGAGGATAGGCGAACTTGGAAAGCGGATCCTTCGGGGGTTTTCTCTTGTGCTTCATTCCTGCTTTCCTTGCAAGGTCATACTGGAGGCTCCACCTTTCCCATTGCTCGTTTTTTGTGGAAGGCGAAAGCACCTTTCAAGGTGAGGGCTTTCATTTGGACCTTGGCCTTAGGAAAGATCAACACCAATGAAGTGCGGCAACGTAGGCGGCCTCAGTGGAGCCTTTCTCCTGATATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_398947.p1 GENE.S_Transcript_398947~~S_Transcript_398947.p1 ORF type:internal len:179 (+),score=35.69,zf-RVT|PF13966.2|7.5e-07 S_Transcript_398947:3-536(+)
HASPWKFVSQVAVFFLPLVGLHLGKGSKIRFWEDVWRGDVSFMERFPRVYRLSTLHDAAIVRFFDDGAWNLHLRRSIRDLEMEELSTLLEVLDGVMLSDVEDRRTWKADPSGVFSCASFLLSLQGHTGGSTFPIARFLWKAKAPFKVRAFIWTLALGKINTNEVRQRRRPQWSLSPDM

Click here to download the sequence:
Link to NCBI Protein BLAST