Transcript Information: S_Transcript_39897.p1


Annotated TAIR IDAT3G51950.1
Annotated Gene NameZinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19278244-19280407 | Reverse length=540
E-Value3.7E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.3141740204505
Replicate 22.1583163697569
Replicate 32.2051097491262
Condition 2: 8 Hour
Replicate 14.8677521376064
Replicate 23.6475840173467
Replicate 34.6338799141264
Condition 3: 24 Hour
Replicate 13.3242214007426
Replicate 23.6951866700566
Replicate 33.5639845355055


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39897.p1 GENE.S_Transcript_39897~~S_Transcript_39897.p1 ORF type:internal len:92 (+),score=28.16,zf-CCCH|PF00642.20|4e-06 S_Transcript_39897:3-275(+)
TCTTTTAATGATATGTACTACGGAACTGATGATTCAACTTCTGGGTTTGGCTTCAAGCCTTGTCTTTACTATGCTAGGGGGTTTTGCAAGAATGGGACTACTTGTAAGTTTGTTCATGGTGCTGGGTTTGGAGATTCTGGTGATAATTCTGTTCCCAAGTTGGATCCTTTTGAGCAGTGCCAAGAAGAAATGCTAAGGTCAAAGTTTGCTCAGCAACAAAGATTGGCTGCCCAATTGATGGCTAGTGGGGTTAATTTCCCTTACAAGAAGTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39897.p1 GENE.S_Transcript_39897~~S_Transcript_39897.p1 ORF type:internal len:92 (+),score=28.16,zf-CCCH|PF00642.20|4e-06 S_Transcript_39897:3-275(+)
SFNDMYYGTDDSTSGFGFKPCLYYARGFCKNGTTCKFVHGAGFGDSGDNSVPKLDPFEQCQEEMLRSKFAQQQRLAAQLMASGVNFPYKKL

Click here to download the sequence:
Link to NCBI Protein BLAST