Transcript Information: S_Transcript_39901.p1


Annotated TAIR IDAT5G43560.1
Annotated Gene NameTRAF-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:17501043-17505526 | Forward length=1055
E-Value8.1E-259
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.5371710502455
Replicate 27.4008091553689
Replicate 310.03845128601
Condition 2: 8 Hour
Replicate 19.4479577354387
Replicate 29.3452025963415
Replicate 310.388102946731
Condition 3: 24 Hour
Replicate 114.378910652037
Replicate 28.0327433435155
Replicate 310.695423893309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39901.p1 GENE.S_Transcript_39901~~S_Transcript_39901.p1 ORF type:complete len:474 (+),score=123.85,MATH|PF00917.22|2.9e-26 S_Transcript_39901:258-1679(+)
ATGGCTGGGGTTGCGAGCGAGGAGTCTGATGCTGGGAGGTCATCATCGTCGGAGGGGTTATCGGGTGGGCAACATTGTCAGTCAGGGGATGCTTTGGCAGAATGGCGGTCTTCGGAGCAGGTTGAGAATGGCACTCCCTCTACTTCACCGCCGTACTGGGATACTGACGACAGTGATGAGGATGGAGGACCTAAACCTTCAGAGCTGTACGGAAAGTACACATGGAAGATAGAAAAGTTTTCCCAGATCAACAAGCGAGAGCTTCGTAGTAATGCCTTTGAAGTTGGCGGCTACAAATGGTATATTTTGATCTATCCACAGGGGTGTGATGTGTGCAATCATCTCTCCTTGTTCCTCTGTGTTGCGAACCATGATAAGCTTCTTCCAGGGTGGAGTCATTTTGCTCAATTTACTATAGCTGTGGTGAATAAAGATCCCAAAAAATCGAAATATTCTGATACACTACATCGCTTCTGGAAGAAAGAACATGATTGGGGTTGGAAAAAATTTATGGAGCTATCAAAAGTGTCTGATGGTTTTGTGGATGCAGACACACTTATTATAAAGGCTCAGGTTCAAGTAATCAGGGAGAAAGCAGATCGTCCATTCCGTTGCCTTGACTGTCAGTATAGAAGAGAGCTTGTTCGAGTTTATTTAACCAATGTAGAGCAGATCTGCCGGCGTTTTGTTGAAGAGAGAAGAGGAAAGCTAGGAAAGCTGATAGAGGACAAAGCCAGATGGTCAAGCTTTTGTGCATTTTGGTTAGGAATGGATCAAAATGCCAGACGTCGCATGTCTAGGGAGAAGAAGGACATGATACTGAAAGTCGTGGTTAAGCATTTTTTCATAGAAAAGGAAGTCACATCGACTCTGGTTATGGACTCCTTGTATAGTGGACTTAAGGCACTTGAAGGCCAAAGCAAAGGCAAGAAAGGGAAGGGAAAATTGCTTGAGGGTGAAGATATGCCTGCTCCAATCATTCAGTCAGAGAAGGATATGTTTGTTTTGGTAGATGATGTCTTGTTACTACTTGAGAGGGCTGCAATGGAACCGCTTCCCCCAAAGGATGACAAGGGTCCCCCTCAGAACCGAAAGGATGGAGCCAGTGGAGAGGAGTTCAACAAGGATTCAATTGAGCGTGATGAGAGGCGTTTGACAGAATTAGGTCGAAGGACAGTGGAGATATTTGTGCTTGCCCATATTTTCAGCAACAAAATTGAAGTGGCCTACCAAGAAGCTGTTGCCTTGAAGAGGCAAGAGGAACTGATCCGTGAAGAGGAGGCTGCATGGTTAGCTGAGAGTGAGCAGAAAGCAAAGCGAGGTGCTGAAAAGGACAAGAAATCAAAGAAGAAACAGGTTCCCTTTGTAAAAATGCATGTTTTGAGTCTTTATTTATGTGCGTCTAACTCCCAAATATTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39901.p1 GENE.S_Transcript_39901~~S_Transcript_39901.p1 ORF type:complete len:474 (+),score=123.85,MATH|PF00917.22|2.9e-26 S_Transcript_39901:258-1679(+)
MAGVASEESDAGRSSSSEGLSGGQHCQSGDALAEWRSSEQVENGTPSTSPPYWDTDDSDEDGGPKPSELYGKYTWKIEKFSQINKRELRSNAFEVGGYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVSDGFVDADTLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRGKLGKLIEDKARWSSFCAFWLGMDQNARRRMSREKKDMILKVVVKHFFIEKEVTSTLVMDSLYSGLKALEGQSKGKKGKGKLLEGEDMPAPIIQSEKDMFVLVDDVLLLLERAAMEPLPPKDDKGPPQNRKDGASGEEFNKDSIERDERRLTELGRRTVEIFVLAHIFSNKIEVAYQEAVALKRQEELIREEEAAWLAESEQKAKRGAEKDKKSKKKQVPFVKMHVLSLYLCASNSQIF*

Click here to download the sequence:
Link to NCBI Protein BLAST