Transcript Information: S_Transcript_39903.p1


Annotated TAIR IDAT1G04300.3
Annotated Gene NameTRAF-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:1148818-1153895 | Reverse length=1082
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 138.591182176409
Replicate 239.875304419186
Replicate 341.988716127287
Condition 2: 8 Hour
Replicate 143.957941161586
Replicate 243.431163252429
Replicate 339.850555723849
Condition 3: 24 Hour
Replicate 143.288065971291
Replicate 242.628605311729
Replicate 340.571712409981


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39903.p1 GENE.S_Transcript_39903~~S_Transcript_39903.p1 ORF type:complete len:1142 (+),score=280.86,MATH|PF00917.22|1.1e-25,MATH|PF00917.22|1.6e+04 S_Transcript_39903:258-3683(+)
ATGGCTGGGGTTGCGAGCGAGGAGTCTGGTGCTGGGAGGTCGTCGTCGGAGGGGTTATCGAGTGGGCAACGCTGTCAATCAGGGGATGCGTTGGCGGAATGGCGGTCTTCGGAGCAGGTTGAGAATGGCACTCCCTCTACTTCACCGCCGTACTGGGATACTGACGACAGTGATGAGGATGGAGGACCTAAACCTTCAGAGCTGTACGGAAAGTACACATGGAAGATAGAAAAGTTTTCCCAGATCAACAAGCGAGAGCTTCGTAGTAATGCCTTTGAAGTTGGCGGCTACAAATGGTATATTTTGATCTATCCACAGGGGTGTGATGTGTGCAATCATCTCTCCTTGTTCCTCTGTGTTGCGAACCATGATAAGCTTCTTCCAGGGTGGAGTCATTTTGCTCAATTTACTATAGCTGTGGTGAATAAAGATCCCAAAAAATCGAAATATTCTGATACACTACATCGCTTCTGGAAGAAAGAACATGATTGGGGTTGGAAAAAATTTATGGAGCTATCAAAAGTGTCTGATGGTTTTGTGGATGCAGACACACTTATTATAAAGGCTCAGGTTCAAGTAATCAGGGAGAAAGCAGATCGTCCATTCCGTTGCCTTGACTGTCAGTATAGAAGAGAGCTTGTTCGAGTTTATTTAACCAATGTAGAGCAGATCTGCCGGCGTTTTGTTGAAGAGAGAAGAGGAAAGCTAGGAAAGCTGATAGAGGACAAAGCCAGATGGTCAAGCTTTTGTGCATTTTGGTTAGGAATGGATCAAAATGCCAGACGTCGCATGTCTAGGGAGAAGAAGGACATGATACTGAAAGTCGTGGTTAAGCATTTTTTCATAGAAAAGGAAGTCACATCGACTCTGGTTATGGACTCCTTGTATAGTGGACTTAAGGCACTTGAAGGCCAAAGCAAAGGCAAGAAAGGGAAGGGAAAATTGCTTGAGGGTGAAGATATGCCTGCTCCAATCATTCAGTCAGAGAAGGATATGTTTGTTTTGGTAGATGATGTCTTGTTACTACTTGAGAGGGCTGCAATGGAACCGCTTCCCCCAAAGGATGACAAGGGTCCCCCTCAGAACCGAAAGGATGGAGCCAGTGGAGAGGAGTTCAACAAGGATTCAATTGAGCGTGATGAGAGGCGTTTGACAGAATTAGGTCGAAGGACAGTGGAGATATTTGTGCTTGCCCATATTTTCAGCAACAAAATTGAAGTGGCCTACCAAGAAGCTGTTGCCTTGAAGAGGCAAGAGGAACTGATCCGTGAAGAGGAGGCTGCATGGTTAGCTGAGAGTGAGCAGAAAGCAAAGCGAGGTGCTGAAAAGGACAAGAAATCAAAGAAGAAACAGGGTAAACAGAAGCGGAACAACCAGAAGGGAAGAGAGAAGGTGAAGGATGAAAAGCCTGTTGTCACGATGCAAGATAAAAAGCTTCATCAAACTCAGATTGCTGATAGGAAAGACCTGGATGAGTCCCAAACGATGCCTGAAAAGGATGAAGCCCTTGAAGATGTATCTGATGTGTCTGATTCTGTGGAAGGTGCTGTGGACATGCTACAGCACGATTCCGAAGATAGAGATGCAAGTCCTGTTAACTGGGACACAGATACATCAGAAATCCAGCCCCCAGCGGAGGTGAGTGGTAGTGAAATCAGCAGTGTATCGACTGTTCCAAATGGAGTGGATAAGAGGAGTTCATCTGTAATGGATGATAGTTCCTCAACATGTTCTACAGATTCTGCCCCCTCAGTCATTAATGGGTCATACAGATCAAATTCCTTCGTGAAACATAAAAGTCAAAAGTCACCTACAAGAGGAAAGAACTATCGAGGTAAGGTGACATATGAGGAATATGGTGGGGCAAATGAGGCAGAAAGTCGGCCCTCTGAACTTGCTGATGCTGGGTTTCACAATGACGTTTCTCCTAGTCGCAAAGCAGTTGAATCTAATGAGTCTGACGGAGCTGTTGTTACAGCCTTGCAGGATAGGACAAAGTGGCCAGAGTTGACTGCAGCTAAGAAACAGGATGACGAGGTGGTCCTGCTGCAGAGGAAGCCAAGCAACAAGGACCATGTGGATGTAGGAACATCCAAAGACAAAATGGCTGCAGCTCCACGCCTATCTAAGAGCCCTTCGAGAAATGCAAGTGCAGTACCAGTAGTTCAGTCGAAGTCAGACTTGAAAAGTATTCCTCCTGGTGATTCGGCTGCAGTAGCACGGAAAACGTTATCAAATGGGCAACAACAAACTGAGAAGGCTACATCAGTGGCAGTTGCATCTCAAACAGCAGCTGTATCAAAACCGGATTCTTCAAAGACATCCCCAAAACCTGTTGATAAACTTAATGTACAGCAGGCAGCGGGATTGTCAAGGCCATCAAGTGCTCCTGTTATTCCTGCGACCTTGCCAGCTAGCCCAGTTGTTTCCATGGTACAAGCAGCAGCATCAAGCGCTCCACTGTTGTCCCGTTCAGTTAGCGCCACTGGACGCTTGGGTCCTGACCCGTCTTCTATAGGTCATGCATATGTTCCACAATCCTATAGAAATGCAATTGTGGGTAACTCATTGAATGCAAACTCAGCTAGTTTCACACATTCCCCTCAGTCTGCAAATATAATGGTCAGTGCATCAACAGTTTTCACCCAACAGCCTGCATTGGTACCCTCTTCGATATATCTTCCTCAAGCTCCTGAAAGGATGGAACCAAACTGTGTTAGTTCGGGGATTTCTTTCACTGCAACTCCTCAGGAGGACGTGCTTGGTAACCAAACATGGATGGATAGCCCTCAGAGTGATGTCAGCAGAAGTTTAATGTTTGAATCGGCATCCAGGCTTCATGATATTCCAAGCTTTGATTTGTATCGGCCCATGAATTGCAGGCCCCATGAACTCTTTCCCTCTGAATTATCAGCTGGGACTTCTGGACGTCAGGTTCAAGGTGCATTAGCTGATGAATTCCCACACCTGGACATCATAAATGATCTGCTGGATGATGAGCAGGGCATCGCGAGGGCAACGCATGGGAGCACTACCTTCCAGGGTCTCAGCAACGGTCCCACCCTTTTCAATAGGCAGCTCACCTACCCTGCAAGTGATATGAGTGAAGTGGGTTCATTGGGAAGCTCATGTAGGTTTGATAGATCCAGAAGTTACCCTGATGATGGCTTCCAGCAGGAGCATGCTTCTAGTAGCCATTATGATTCAGTGCGAGAGTTCATACCCCAGGGTAATTCGATGCCTTATATGAATGGCCAGATTGATAGCTTGGTACCGAACCAGTGGCAGATGTTGGCTCCCGATCTTTCATTGTTGGGCTTGAGAAGTTCGGGGATGGATAGTTACCCGTATAATGTTTCTGATTACTCGAACCTGGCGTGTGGCGTAAATGGTTACACAATGTTCCGGCCTTCAAATGGACATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39903.p1 GENE.S_Transcript_39903~~S_Transcript_39903.p1 ORF type:complete len:1142 (+),score=280.86,MATH|PF00917.22|1.1e-25,MATH|PF00917.22|1.6e+04 S_Transcript_39903:258-3683(+)
MAGVASEESGAGRSSSEGLSSGQRCQSGDALAEWRSSEQVENGTPSTSPPYWDTDDSDEDGGPKPSELYGKYTWKIEKFSQINKRELRSNAFEVGGYKWYILIYPQGCDVCNHLSLFLCVANHDKLLPGWSHFAQFTIAVVNKDPKKSKYSDTLHRFWKKEHDWGWKKFMELSKVSDGFVDADTLIIKAQVQVIREKADRPFRCLDCQYRRELVRVYLTNVEQICRRFVEERRGKLGKLIEDKARWSSFCAFWLGMDQNARRRMSREKKDMILKVVVKHFFIEKEVTSTLVMDSLYSGLKALEGQSKGKKGKGKLLEGEDMPAPIIQSEKDMFVLVDDVLLLLERAAMEPLPPKDDKGPPQNRKDGASGEEFNKDSIERDERRLTELGRRTVEIFVLAHIFSNKIEVAYQEAVALKRQEELIREEEAAWLAESEQKAKRGAEKDKKSKKKQGKQKRNNQKGREKVKDEKPVVTMQDKKLHQTQIADRKDLDESQTMPEKDEALEDVSDVSDSVEGAVDMLQHDSEDRDASPVNWDTDTSEIQPPAEVSGSEISSVSTVPNGVDKRSSSVMDDSSSTCSTDSAPSVINGSYRSNSFVKHKSQKSPTRGKNYRGKVTYEEYGGANEAESRPSELADAGFHNDVSPSRKAVESNESDGAVVTALQDRTKWPELTAAKKQDDEVVLLQRKPSNKDHVDVGTSKDKMAAAPRLSKSPSRNASAVPVVQSKSDLKSIPPGDSAAVARKTLSNGQQQTEKATSVAVASQTAAVSKPDSSKTSPKPVDKLNVQQAAGLSRPSSAPVIPATLPASPVVSMVQAAASSAPLLSRSVSATGRLGPDPSSIGHAYVPQSYRNAIVGNSLNANSASFTHSPQSANIMVSASTVFTQQPALVPSSIYLPQAPERMEPNCVSSGISFTATPQEDVLGNQTWMDSPQSDVSRSLMFESASRLHDIPSFDLYRPMNCRPHELFPSELSAGTSGRQVQGALADEFPHLDIINDLLDDEQGIARATHGSTTFQGLSNGPTLFNRQLTYPASDMSEVGSLGSSCRFDRSRSYPDDGFQQEHASSSHYDSVREFIPQGNSMPYMNGQIDSLVPNQWQMLAPDLSLLGLRSSGMDSYPYNVSDYSNLACGVNGYTMFRPSNGH*

Click here to download the sequence:
Link to NCBI Protein BLAST