Transcript Information: S_Transcript_39910.p1


Annotated TAIR IDAT4G21540.1
Annotated Gene Namesphingosine kinase 1
Annotated Gene Symbol(s)SPHK1
Annotation TypeOrtholog
Chromosome Positionchr4:11459609-11462356 | Forward length=485
E-Value2.8E-195
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.901492170008
Replicate 29.2832502509762
Replicate 38.8014514643048
Condition 2: 8 Hour
Replicate 18.934134376941
Replicate 28.0277853953117
Replicate 37.7653361038183
Condition 3: 24 Hour
Replicate 19.4303048948467
Replicate 28.0499877183747
Replicate 38.9127078590028


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39910.p1 GENE.S_Transcript_39910~~S_Transcript_39910.p1 ORF type:complete len:549 (+),score=68.35,DAGK_cat|PF00781.20|8.7e+03,DAGK_cat|PF00781.20|4.1e-29 S_Transcript_39910:180-1649(+)
ATGGATCAAATTGGCGGAGAATCACAAATTCTAGTCTCCGAAAACGTACTAATCAACGGTTCATTCATTCCGTTAATCCTCCACTCCGACGGCACCCTCCGTTGGCTCGACAAATGTTTGACCTTAGAAAAAGAAGCTCTCGGAGTTTACCTAGAAGGTTCTACAATCATTATTAAATGCGCCATCCAGAAAACTGGTGCTGGTATCATCTGTTGCTCCGCTCAGGATACCACCATCAGACGCACCTTCGTTTTCCAGCCTTCCTCTGAGGACTCTCTACAGAATTGGTTCCAGAAGCTTCGCCAATTCCTCGATTTTCTCGATCGACCGAAAAGGCTGTTTGTGTTGGTGAACCCTTACGGTGGCAAGAGAACGGCGTTGGAGATATTTTATAACACCGTCCAGCCTTTGCTTGATGATGCTGATATTCAATTCAATTTGCAAGAAACTAAATATCGGCTTCATGCGAAGGAGCTTGTTTATAGACTGGATCTAAACAAGTATGACGGCATTGTTTGTGTTAGTGGTGATGGTATCTTGGTCGAGGTGGTGAATGGCTTGCTGCAAAGAGACGATTGGGAAGCTGCAATCAAGATGCCTCTCGGTGTGATTCCAGGAGGTACTAGTAATGGTATGGTGAAGTCCCTTTTAGATGCTGTTGATCAACCTTGTTCTGCATTTAATGCTACTCTTGCAATTATCCGAGGGCATAAACGCTCACTTGATGTTGCTACTGTTGCACAAGGGAAAACAAAGTCTTTTAGTGTTTTGATGCTTGCATGGGCTCTTGTTGCAGACATAGACATTGAATCAGAGAAATGGAGGTGGATGGGAAGTGCTCGTATTGATTTATATGCTATCAACAGAATATTTAACTTGAGGAAGTATAGTGGTCGTATTCATTTTGTCCCTGCACCTGGATATGAGGATTACGTTGAGAAAATCAGTCAAAAAGTTATATCAGTCCAGGACTTGCCATTCTGCAGTTCTAGTGACATGCAGAGTGGTGTGCAAGAAAAAGGTTATCCAGGACCTAACGTTGACTTGGATAAGATGAATTGGAGGACCATGGAAGGACCTTTTGTTTCAGTTTGGATCCATAATGTACCCTGGGGTGGTGAAGGTCAAATGCCAGCTCCTGATGCTAAGTTTTCAGATGGTTGTTTAGATGTAATTCTTATGAGAGATTGCTCAAAATTGGGTCTGCTGTCGTTAATGACGGAACTGGGCAATGGGAGACATGTCAAATCACCATGTGTCTCATACTTTAAGGTCCGAGCCTTTGTGTTGGAGCCTGGTCCACTTATCAAAGATAAAACAAGAGGAGGAATCATAGACTGTGACGGGGAGGTCTTGGCTAGAGGTAATCGTACATATAAGTGCGATCAAAAGTCCTTGATGTCATATGAAAGTCTTCAAATAACCATCGATCAAGGTCTAGCTACTCTTTTCTCCCCTCCGATTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39910.p1 GENE.S_Transcript_39910~~S_Transcript_39910.p1 ORF type:complete len:549 (+),score=68.35,DAGK_cat|PF00781.20|8.7e+03,DAGK_cat|PF00781.20|4.1e-29 S_Transcript_39910:180-1649(+)
MDQIGGESQILVSENVLINGSFIPLILHSDGTLRWLDKCLTLEKEALGVYLEGSTIIIKCAIQKTGAGIICCSAQDTTIRRTFVFQPSSEDSLQNWFQKLRQFLDFLDRPKRLFVLVNPYGGKRTALEIFYNTVQPLLDDADIQFNLQETKYRLHAKELVYRLDLNKYDGIVCVSGDGILVEVVNGLLQRDDWEAAIKMPLGVIPGGTSNGMVKSLLDAVDQPCSAFNATLAIIRGHKRSLDVATVAQGKTKSFSVLMLAWALVADIDIESEKWRWMGSARIDLYAINRIFNLRKYSGRIHFVPAPGYEDYVEKISQKVISVQDLPFCSSSDMQSGVQEKGYPGPNVDLDKMNWRTMEGPFVSVWIHNVPWGGEGQMPAPDAKFSDGCLDVILMRDCSKLGLLSLMTELGNGRHVKSPCVSYFKVRAFVLEPGPLIKDKTRGGIIDCDGEVLARGNRTYKCDQKSLMSYESLQITIDQGLATLFSPPIY*

Click here to download the sequence:
Link to NCBI Protein BLAST