Transcript Information: S_Transcript_39911.p3


Annotated TAIR IDAT4G21540.1
Annotated Gene Namesphingosine kinase 1
Annotated Gene Symbol(s)SPHK1
Annotation TypeOrtholog
Chromosome Positionchr4:11459609-11462356 | Forward length=485
E-Value3.3E-48
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4364015215306
Replicate 23.5735504212876
Replicate 32.2079331931071
Condition 2: 8 Hour
Replicate 14.8057217616074
Replicate 25.3566398151458
Replicate 33.7527900712995
Condition 3: 24 Hour
Replicate 14.6151162304072
Replicate 26.7033808887788
Replicate 36.9271812098558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39911.p3 GENE.S_Transcript_39911~~S_Transcript_39911.p3 ORF type:complete len:142 (+),score=9.47 S_Transcript_39911:2445-2870(+)
ATGATCTATCAGCACTTTTCTCATGTAACTTACAAAGCAGAGTTTTGTTTTGGTCTTCCTTTTCTGGCTGTCGGCCTGTGTTTCTTAATCTTGGTTGATTTACAGTTTTCAGATGGTTGTTTAGATGTAATTCTTATGAGAGATTGCTCAAAATTGGGTCTGCTGTCGTTAATGACGGAACTGGGCAATGGGAGACATGTCAAATCACCATGTGTCTCATACTTTAAGGTCCGAGCCTTTGTGTTGGAGCCTGGTCCACTTATCAAAGATAAAACAAGAGGAGGAATCATAGACTGTGACGGGGAGGTCTTGGCTAGAGGTAATCGTACATATAAGTGCGATCAAAAGTCCTTGATGTCATATGAAAGTCTTCAAATAACCATCGATCAAGGTCTAGCTACTCTTTTCTCCCCTCCGATTTACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39911.p3 GENE.S_Transcript_39911~~S_Transcript_39911.p3 ORF type:complete len:142 (+),score=9.47 S_Transcript_39911:2445-2870(+)
MIYQHFSHVTYKAEFCFGLPFLAVGLCFLILVDLQFSDGCLDVILMRDCSKLGLLSLMTELGNGRHVKSPCVSYFKVRAFVLEPGPLIKDKTRGGIIDCDGEVLARGNRTYKCDQKSLMSYESLQITIDQGLATLFSPPIY*

Click here to download the sequence:
Link to NCBI Protein BLAST