Transcript Information: S_Transcript_399116.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-05
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.27121670711177
Condition 2: 8 Hour
Replicate 10.78402170283577
Replicate 20.32899777411363
Replicate 30.15673417356604
Condition 3: 24 Hour
Replicate 10.32124828662638
Replicate 20
Replicate 30.18545620886115


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_399116.p1 GENE.S_Transcript_399116~~S_Transcript_399116.p1 ORF type:internal len:136 (+),score=16.79,zf-RVT|PF13966.2|5.6e-06,zf-RVT|PF13966.2|4.1e+03 S_Transcript_399116:2-406(+)
GAAAGGTCAACACTAATGATATGCGATAGCGACGACGACCTTTATGGTGCCTCTCACCGGATGTGTGTCATGTGTGGTTTGAGTGGGGAGACAGCCTTTCATCTCTTTCTCCATTGTCCTGTGGTGAGGTCTTTATGGGCGAGGCTATTTGGTGTGTATGGGGAGACCTTTGTGAGCCCTTCTACTGTTTTGGATTTCCTCCATATTCGTTTTTGGGGATTCGGTAGGGATAAGGAGAAGGGTATTTTATGGCACAATGCAATTTTGGCAACCCTATGGTGTGTGTGGCCGGAAAGGAATGCTCGTGTGTTTAAGCAGATCTCTCTCCCTATCCCTCTTTTGTGGGAGTGTGTCACCTTCTTGGCCTCCCTTTGGAGTAAGGCTGGGGGAGCTTTTCGTAGTTAC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_399116.p1 GENE.S_Transcript_399116~~S_Transcript_399116.p1 ORF type:internal len:136 (+),score=16.79,zf-RVT|PF13966.2|5.6e-06,zf-RVT|PF13966.2|4.1e+03 S_Transcript_399116:2-406(+)
ERSTLMICDSDDDLYGASHRMCVMCGLSGETAFHLFLHCPVVRSLWARLFGVYGETFVSPSTVLDFLHIRFWGFGRDKEKGILWHNAILATLWCVWPERNARVFKQISLPIPLLWECVTFLASLWSKAGGAFRSY

Click here to download the sequence:
Link to NCBI Protein BLAST