Transcript Information: S_Transcript_39921.p1


Annotated TAIR IDAT3G60510.3
Annotated Gene NameATP-dependent caseinolytic (Clp) protease/crotonase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:22357141-22360003 | Reverse length=426
E-Value2.3E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.2525893253324
Replicate 27.1067639440072
Replicate 36.4726910293406
Condition 2: 8 Hour
Replicate 16.4078696866385
Replicate 27.2600951114497
Replicate 37.0198825045251
Condition 3: 24 Hour
Replicate 18.4018782656131
Replicate 27.7906852293694
Replicate 38.1244085343403


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_39921.p1 GENE.S_Transcript_39921~~S_Transcript_39921.p1 ORF type:complete len:416 (+),score=77.25,ECH_2|PF16113.1|1.6e-112,ECH_1|PF00378.16|8.3e-23 S_Transcript_39921:40-1248(+)
ATGGCGACTATTATCAAGCGTAACCTCACACTAAGATCATCATCTCGTTTCTTCGATACATTTAAAAGAGGACTTTGCTCTCACTCTCAACCTTCCTCCAATGCAGATGACGTGGTTTTAGTTGAAGGAAAAGGACATTGTCGAACAGCCATTCTCAACAGGCCTCCTTCTCTCAACGCCCTCAACACTTCTATGGGTGCTAGGTTGCAAAAGTTGTACAAATGCTGGGAAGATGATCCCAATGTTGGTTTTGTGATGATGAAGGGCAGTGGCAGGGCTTTTTGTGCTGGCGGAGACATTGTTTCTCTTTATAATAAACTCAATGCAGGAAGAATAGAAGACTCAAAAGAGTTTTTTCGAACATTATATACATATATATACATACTTGGAACTTATTTGAAGCCACATGTGGCTCTTTTGAATGGCATTACTATGGGTGGCGGTGGAGGTGTTTCAATCCCAGGAACATTTCGTCTTGCAACAGACAAAACTGTTTTTGCGACCCCGGAAACTATCATTGGGTTTCATCCTGATGCTGGTGCCTCTTTCTATCTTTCACATTTACCTGGATACATTGGGGAGTATTTGGCTCTGACTGGCGAAAAACTCAGTGGTGCTGAAATGCTTGCTTGTGGGCTCGCAACACATTTTTCACTTAGTGCTAAGCTTCCTCAAATTGAAGCACATTTAGGCAGTGTGGTCACAGATGATTTTTCTGTTGTTGAGACTTCCCTGCAACAGTTTTCTGATGTTGTCGCTCCTGATAATATGAGCGTACTTCGCAGGTTGGAGACAGTGAATAAATGTTTTGGCTTTGACTCCGTTGAAAAAATAATTGATTCACTGGAAGATGAAGCAACCAAGACTGATCATGCCTGGTGTGCTTCCACTATAAAGAGGTTACAGGAAGTGTCACCATTGAGCTTGAAAGTTTCATTGAGATCAATACGGGAAGGAAGGTATCAGACTCTTGACCAGTGCCTGGTTCGTGAGTATCGCATGTCACTTCAGGGCATCTCTGGAAGGATTTCAAATGACTTTCGAGAGGGTGTACGGGCACGCATGGTGGATAGGGACTTCTCTCCAAAGTGGGACCCACCGAGCTTAGATGGTGTCTCCAAAGATATGGTGGATGAATATTTCTCCCCACTCAGTCATTCTGAACCGGACTTAGAATTACCAACAAAGCTGCGAGAAGCGTTTTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_39921.p1 GENE.S_Transcript_39921~~S_Transcript_39921.p1 ORF type:complete len:416 (+),score=77.25,ECH_2|PF16113.1|1.6e-112,ECH_1|PF00378.16|8.3e-23 S_Transcript_39921:40-1248(+)
MATIIKRNLTLRSSSRFFDTFKRGLCSHSQPSSNADDVVLVEGKGHCRTAILNRPPSLNALNTSMGARLQKLYKCWEDDPNVGFVMMKGSGRAFCAGGDIVSLYNKLNAGRIEDSKEFFRTLYTYIYILGTYLKPHVALLNGITMGGGGGVSIPGTFRLATDKTVFATPETIIGFHPDAGASFYLSHLPGYIGEYLALTGEKLSGAEMLACGLATHFSLSAKLPQIEAHLGSVVTDDFSVVETSLQQFSDVVAPDNMSVLRRLETVNKCFGFDSVEKIIDSLEDEATKTDHAWCASTIKRLQEVSPLSLKVSLRSIREGRYQTLDQCLVREYRMSLQGISGRISNDFREGVRARMVDRDFSPKWDPPSLDGVSKDMVDEYFSPLSHSEPDLELPTKLREAFS*

Click here to download the sequence:
Link to NCBI Protein BLAST