Transcript Information: S_Transcript_399478.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.095730220270433
Replicate 20.15872510473032
Replicate 30.26536310911655
Condition 2: 8 Hour
Replicate 10
Replicate 20.24142282704741
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.27218033530701


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_399478.p1 GENE.S_Transcript_399478~~S_Transcript_399478.p1 ORF type:3prime_partial len:278 (+),score=36.07,RVT_1|PF00078.23|2.5e-11 S_Transcript_399478:27-833(+)
ATGGAGTACTTGTCTAGGTGCTTGAAGGAAATGATTAAAAACCCTGACTATAATTTGCATCCAAAATGTAGTAGGCAAGGCATAACCCATTTGATTTTTGCTGATGACTTGATGCTGTTTGCAAGAGGTGATCTGGTTTCTGTCCACCTGCTACAGGAAGCTTTTGATAAATTTTCTCAAGCCTCTGGTCTGAAGACAAATGTAGATAAAAGCTCTTTCTATTGTGGAGGGATAGCTGATACTGATAAAGCCTTATTTGTGGAGTTCCTGAAAATGCAAAAAGGTCTGTTACCAGTCAGATATTTAGGCATGCCCCTTTCTTCTAGGAAGATCACAGTGGATCAATGCCTACCTTTAGTGGATAAAATAATAGCTAAGGTAACTAGCTGGATAGCTAGATTTCTCTCCTATGCAGGGAGAGCTCAACTAGTACAAGCGGTTATCTTTGGGGTCCAAGCCTTTTGGGCTCAGATTATAATTGTCCCCAAGAAGGTTCTAAAACTTATTGACAGCATATGTAGAAGCTACAGTTGGTCGGGGAAAGCTTCCATCAATAGAAGATCATTAGTAGCATGGGCCAAAGTAACAACTCCCAAGAAAAATGGAGGAATGGGGCTGTTGAATCTCACGAGATGGAACCAGGCATCAATTGGGAAATTATTCTGGGAATTCACACAGAAGAAAGACAAGATGTGGATTAAATGGCTTCATGGATACTACCCAGGTCTGGCTCAAACCAGAAGGATTCCTACACAATTGTCTTGGATGTTAAAAAAGGTGATTGGTACTAGAGATGTGATGCAGGGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_399478.p1 GENE.S_Transcript_399478~~S_Transcript_399478.p1 ORF type:3prime_partial len:278 (+),score=36.07,RVT_1|PF00078.23|2.5e-11 S_Transcript_399478:27-833(+)
MEYLSRCLKEMIKNPDYNLHPKCSRQGITHLIFADDLMLFARGDLVSVHLLQEAFDKFSQASGLKTNVDKSSFYCGGIADTDKALFVEFLKMQKGLLPVRYLGMPLSSRKITVDQCLPLVDKIIAKVTSWIARFLSYAGRAQLVQAVIFGVQAFWAQIIIVPKKVLKLIDSICRSYSWSGKASINRRSLVAWAKVTTPKKNGGMGLLNLTRWNQASIGKLFWEFTQKKDKMWIKWLHGYYPGLAQTRRIPTQLSWMLKKVIGTRDVMQG

Click here to download the sequence:
Link to NCBI Protein BLAST