Transcript Information: S_Transcript_399492.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-17
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.13578061854684
Replicate 20.22513050568893
Replicate 30
Condition 2: 8 Hour
Replicate 10.10880301182211
Replicate 20.45656833958626
Replicate 30.10875432451521
Condition 3: 24 Hour
Replicate 10.44581394878764
Replicate 20
Replicate 30.64341950013051


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_399492.p1 GENE.S_Transcript_399492~~S_Transcript_399492.p1 ORF type:complete len:196 (+),score=29.03,zf-RVT|PF13966.2|3.2e-15 S_Transcript_399492:829-1416(+)
ATGGTTCAAAAAATTGTAAAGGCAGGACAATACATCCAAGGGGTGTGCAGTTGGGAGGAGATTATAAACCAGCAGAAAGTGAAAACCAAAGTAGCTTACTTGAAACTCCTAAGAAAGCAACAGAAGAAAGAATGGCGGAAACTGGTTATGGGGAATGCGGCCTGGCTTAGAGCTACCTTCATACTTTGGTTGACCTTATGGGAGAGATTAAGCACAGCTGATAGGTTGCAGAAATTTGGTATACAATGCCCCCTGCTGTGCTCCTTCTGCAAAGCTGAAATTGAAAATATCCAACATATAATATTTCAATGCCCCTGGACTGTATATGTTTGGAGACAGATGCTCAATTGGATGCATATTCCTTTCCCAACAGATACAAAGCAGACTCTTATCAAGTCCAGTAAACACAAAAGAAGGGGAAAGATGATGAGGCTCCTTGCTGCTGAGATAATTTATGCCATTTGGATGGAGAGAAACAAAAGAAGATTCAGGGGTCAATCAGGAACTGCTGCTGACCTGATTAGGGAGATTCAGCTCTATATCTGTATTAGAGCAGGAGCTGCAGGCATTACTATAATGCCGAGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_399492.p1 GENE.S_Transcript_399492~~S_Transcript_399492.p1 ORF type:complete len:196 (+),score=29.03,zf-RVT|PF13966.2|3.2e-15 S_Transcript_399492:829-1416(+)
MVQKIVKAGQYIQGVCSWEEIINQQKVKTKVAYLKLLRKQQKKEWRKLVMGNAAWLRATFILWLTLWERLSTADRLQKFGIQCPLLCSFCKAEIENIQHIIFQCPWTVYVWRQMLNWMHIPFPTDTKQTLIKSSKHKRRGKMMRLLAAEIIYAIWMERNKRRFRGQSGTAADLIREIQLYICIRAGAAGITIMPS*

Click here to download the sequence:
Link to NCBI Protein BLAST