Transcript Information: S_Transcript_399669.p1


Annotated TAIR IDAT5G40450.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:16184799-16195513 | Reverse length=2889
E-Value8E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.4540511977534
Replicate 23.831262857293
Replicate 34.8591639980744
Condition 2: 8 Hour
Replicate 15.4909687642917
Replicate 26.0283424478305
Replicate 37.2116490400087
Condition 3: 24 Hour
Replicate 13.4009998248829
Replicate 22.5106617614517
Replicate 32.7940588113452


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_399669.p1 GENE.S_Transcript_399669~~S_Transcript_399669.p1 ORF type:5prime_partial len:334 (-),score=72.12 S_Transcript_399669:311-1312(-)
CAGGGAGTTAGCAGAGGCTCAGTAGGTGAGGACACTAAAGCACAAGCTTCTGAAAAAATTGCAGGAGAGGATGAAAAGCAAGCAAAAATAGCCACAGAGAAGGAAAACACAGACGAAAAGGTTCTGTGCCATGATCCTAAGATGTTACAAGAAAGGTTGCAGGCTACCGAGTCCCTTAACAAAACAGAAAAGGCTGTGATAATAAATGAACAGGAGAGAAATGTCAAGTGTATTGTTCCAACAGCTACTCGTCAGGCAAATGAACAAACTACTTTAAAAGGAAGTTTTATTGTTGCTGAAATCCCACACACCGATGCTAGCAACTTAGTTCTTAAAACTCCAGAAACAACGGAACAAAGAAAAGATTCTCTAACTGAGGTTTCTAACAGCCCAATCAAACCAAAGAACCAAGAGCAAGCATCAAATGCTACGGATGGTTTTCCCTTCCACAAATATCCAAAAGACACAGACGAAAAACAATTTAAGTTACATATGGAAAACCAGCAAGAAAGTGAACAAGGGCCATCAGAAGAAAACCAAGTAAGACATAAGGATCATCAAGATAAGGACTCACTAAAAGCTCAACAAATGAAGGATGTGAGGGAGCTTGGCAATACCAATGTGCAGAGCACTCTGATAAAAAAAGAAGACGGAGAACAAATTCTTTCCACGGAAAAAACAACAAACATAGAAGATATCATAGTGGGGGGAATGAAAATTGATGAGGAGAAGGATCAGAAAGAAAATTATGAACATCAGAAAGATTCAGATTTGAAGGCTCCTTTTTTACTAGAAGCATCAAGGGACATGGATCTTAAGGCAAACTATAGAAAACCACATAACATACTATCAGGTGTTGGGTCAAAGGTAAAACATTCTATTTCAAAGATGAAAAAAAGCCATCACTTGCTCATCTTCTCAGTTTTTGGAAGAAGATATCATCATCAAGTTAAACAAAAACAAGAAGATCTAAGGAAATCCCCAAAGCGAGCTGCTTCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_399669.p1 GENE.S_Transcript_399669~~S_Transcript_399669.p1 ORF type:5prime_partial len:334 (-),score=72.12 S_Transcript_399669:311-1312(-)
QGVSRGSVGEDTKAQASEKIAGEDEKQAKIATEKENTDEKVLCHDPKMLQERLQATESLNKTEKAVIINEQERNVKCIVPTATRQANEQTTLKGSFIVAEIPHTDASNLVLKTPETTEQRKDSLTEVSNSPIKPKNQEQASNATDGFPFHKYPKDTDEKQFKLHMENQQESEQGPSEENQVRHKDHQDKDSLKAQQMKDVRELGNTNVQSTLIKKEDGEQILSTEKTTNIEDIIVGGMKIDEEKDQKENYEHQKDSDLKAPFLLEASRDMDLKANYRKPHNILSGVGSKVKHSISKMKKSHHLLIFSVFGRRYHHQVKQKQEDLRKSPKRAAS*

Click here to download the sequence:
Link to NCBI Protein BLAST