Transcript Information: S_Transcript_400063.p1


Annotated TAIR IDAT5G12340.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28190.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:3992948-3993610 | Reverse length=220
E-Value4.8E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.44355002058634
Replicate 20
Replicate 30.30737893472668
Condition 2: 8 Hour
Replicate 10.71084634390443
Replicate 21.3050245039841
Replicate 30.17763206337484
Condition 3: 24 Hour
Replicate 10.72816278301981
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_400063.p1 GENE.S_Transcript_400063~~S_Transcript_400063.p1 ORF type:5prime_partial len:120 (+),score=15.52 S_Transcript_400063:3-362(+)
ACCCCACCACTCGTCAATATTTGTGGGGGGAGTAATGATTTAAAGGGCCCTTGTAATAATAATAAAGGGCCCTTCGAGTATATTAAGGATAGGGATGGCAGGGTACACATGATCAAAGTTGTCCCTGAGTTTATTGCAAAGATTATTACAAGTAATTTTGGTGGATCGAGCCCGAGTGGGGGTAATAAGCTCATTTGTAGTACTCCTGAATTGCAAAAGCAATATGAACAGCTTGTTAGGGCTAAGGATCAAGCTTGGTCTCCTAAGCTCGAGACGATTTCAGAGCATAAGATTAAGTTTTCACCTTGTAGGTTTATAGGGTTGGAGTGGAAACAGAAGGAGAAGGCAAGTCCTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_400063.p1 GENE.S_Transcript_400063~~S_Transcript_400063.p1 ORF type:5prime_partial len:120 (+),score=15.52 S_Transcript_400063:3-362(+)
TPPLVNICGGSNDLKGPCNNNKGPFEYIKDRDGRVHMIKVVPEFIAKIITSNFGGSSPSGGNKLICSTPELQKQYEQLVRAKDQAWSPKLETISEHKIKFSPCRFIGLEWKQKEKASPC*

Click here to download the sequence:
Link to NCBI Protein BLAST