Transcript Information: S_Transcript_40012.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value3E-160
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1306481351429
Replicate 24.5991917808717
Replicate 34.9867821132394
Condition 2: 8 Hour
Replicate 16.2816482051978
Replicate 28.6513493229154
Replicate 37.8243972326442
Condition 3: 24 Hour
Replicate 13.0688431489808
Replicate 24.6560096289777
Replicate 33.5432781415042


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40012.p1 GENE.S_Transcript_40012~~S_Transcript_40012.p1 ORF type:3prime_partial len:662 (+),score=74.24,RPE65|PF03055.11|1.1e-79,RVT_2|PF07727.10|1.5e-38 S_Transcript_40012:96-1985(+)
ATGGATGCCCTCTCTTCTTCCTTCCTCTCATTCCTACCACAACCCAAGACCAAGCCGAATTCATTGTGGCACTCGCAGTTTCGCATAATTACAACACAAACATCCACTACCATTCTCTCAAAATTTCAAGCGCCTAAATCTCCAATAGTCGTTGATAAATCTTTTCCTTCGACTCTTCTAAATGCATTAGAAAACATGATCAATAAGTTCATCGATCCTCCCAAACGCCCTTCAGTTGACCCTAGGATTGTCCTGTCGGACAACTTTGCTCCTGTGGAGGAGCTCCCTCCAACGGAGTGCGAGATCATTGAGGGCATTTTGCCCTCATGCCTCAACGGAGCCTATATTCGCAACGGCCCCAACCCACAATTTTTACCACACGGACCCTATCAATTGTTTGACGGCGATGGGATGCTACATAGCATCCGTATATCAAATGGCAAGGCCACTTTTTGTAGCCGCTTTGTCAAGACATACAAGTACATGGCTGAGCACGAAGCAGGAAGCAATATCATCCCCAGCATCTTTGGTGGTGTCAATGGCCTCATAGGCTTTGTAGCTCGATCAATTTTGATGGTTGCTAAGATTATTGCCGGTTCAAAGTATGACATGAGTAATGGTTTCGGAGTGGCCAACACCAGCTTAGCCTTGTTTGGAAATCGACTATATGCTCTATGTGAATCAGATCTTCCTTATGAGATAAGCTTAACCCAAACAGGGGACATCGAAACCCTTGGTCGCTCTAACTTCGATGACAAACTCTTTATAAGAATGACGGCTCACCCAAAGATTGATCCTGACACAGGCGAGGCCTTCGCCTTCTACTATGATCTTAAACCTCCATTTCTCACCTATTTCAGATTCGACTCCAAAGGAAACAAACACAAGGATTTGCCAATTTTCTCTAAGGCACGTCCCTCGTTTCTACACTATTTTCCTGTCACAAGAAATTATGCAATCTTTGCCGACATCCAGATTGAAATAGACCCTATGAAGATGATCCTAAAAGGAGGAGGTATATTGCGTTATGAATCAGAAAAGGTATCGAGACTTGGAGTCATTCCGAAGAATGCTAGTGATGAGAAGGACATGAGGTGGTTTGAAGTACCCCGACTTAACTTACTTCACGCCATCAATGCTTGGGAAGAAATGGAACATGATAGCGGGAATGAAGTGGTGGTAATGGTGATCACCAACGTATCATCCCCCGAACGCACATTGGATGACCCATTTGATTTCAACAACATTTTCATGGAGAAGGTTACCATTAATCTCAAGACAGGGGTGGCTTCAAAGAAGCCATTGTCAGCAAGAAATCTAGACTTTGCAGTTATAAATCAAGCCTATATGGGGAGAAGGAATAAGTATATTTATGCAGGAGTACTTGGTGAATCATTGCCAAAAATAAGCGGAGTTGTGAAGGTGGATGTATCGGCTGCCCAAGGAGACAACAGAGAGTGCATAGTAGCGAGCCGGATGTATGGAGCAAGGTGCTATGGAGGTGAACCGTTTTTCGTGGCCAGAGGACCAGATGATCTTGATGCTAAGGAAGATGATGGGTACCTTAATGGCTATTTGAAAGAGGAAGTTTATGTTGAGCAACCCCCTGGTTTTATTAGCATTGAATTCCCAGATTATGTTTTTAGATTGGACAAGGCATTATATGGTCTCAAACAAGCTCCTCGGGCTTGGTATGAGAGATTGTCCAACTTTCTGTTTGAAAACGGTTTCAAAAGAGGAAAAATTGATAAGACACTGTTTCTAAAAACAAAGGGGGAACACTTGCTAGTTGTCCAAATTTATGTTGATGATATTATATTTGGTGCTACTAACGAGTGTTTATGCAAGGAATTCTCTGAGTTGATGCATGGTGAGTTCGAAATGAGTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40012.p1 GENE.S_Transcript_40012~~S_Transcript_40012.p1 ORF type:3prime_partial len:662 (+),score=74.24,RPE65|PF03055.11|1.1e-79,RVT_2|PF07727.10|1.5e-38 S_Transcript_40012:96-1985(+)
MDALSSSFLSFLPQPKTKPNSLWHSQFRIITTQTSTTILSKFQAPKSPIVVDKSFPSTLLNALENMINKFIDPPKRPSVDPRIVLSDNFAPVEELPPTECEIIEGILPSCLNGAYIRNGPNPQFLPHGPYQLFDGDGMLHSIRISNGKATFCSRFVKTYKYMAEHEAGSNIIPSIFGGVNGLIGFVARSILMVAKIIAGSKYDMSNGFGVANTSLALFGNRLYALCESDLPYEISLTQTGDIETLGRSNFDDKLFIRMTAHPKIDPDTGEAFAFYYDLKPPFLTYFRFDSKGNKHKDLPIFSKARPSFLHYFPVTRNYAIFADIQIEIDPMKMILKGGGILRYESEKVSRLGVIPKNASDEKDMRWFEVPRLNLLHAINAWEEMEHDSGNEVVVMVITNVSSPERTLDDPFDFNNIFMEKVTINLKTGVASKKPLSARNLDFAVINQAYMGRRNKYIYAGVLGESLPKISGVVKVDVSAAQGDNRECIVASRMYGARCYGGEPFFVARGPDDLDAKEDDGYLNGYLKEEVYVEQPPGFISIEFPDYVFRLDKALYGLKQAPRAWYERLSNFLFENGFKRGKIDKTLFLKTKGEHLLVVQIYVDDIIFGATNECLCKEFSELMHGEFEMSM

Click here to download the sequence:
Link to NCBI Protein BLAST