Transcript Information: S_Transcript_40020.p1


Annotated TAIR IDAT3G55550.1
Annotated Gene NameConcanavalin A-like lectin protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:20600019-20602073 | Reverse length=684
E-Value3E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.533865097859
Replicate 29.9638404453293
Replicate 313.802305714178
Condition 2: 8 Hour
Replicate 19.9059877602166
Replicate 28.8044049485376
Replicate 310.039076613959
Condition 3: 24 Hour
Replicate 111.979452236777
Replicate 212.136105553786
Replicate 311.065154964825


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40020.p1 GENE.S_Transcript_40020~~S_Transcript_40020.p1 ORF type:5prime_partial len:155 (-),score=41.58 S_Transcript_40020:97-561(-)
CCTCCTGCCACAAGCCACCTCCCAGATAAATTGATCTTACTTGATTGGGTGTGGGATAAATGGAAGGATGGCGTTATACTTGAGGTTATGGACCAAAAGTTGAGGGGTTTGTATGATGAGATGGAGGCTATGATGGTGCTGAAGTTGGGCCTAATGTGCTCCGCTGAGTTGCCTGAAGATCGGCCCACCATGAAGCAGGTGGTGAGGTACTTAGAAGGAGAGGCAGACTTGCCAGAAATGGTGGCAACGCCAAGTAGATATAAAGATAGGAAGAGTGGTAGTAGTCGCCGGAACAAGACTAGTGAGGAAATTGAGGATGATCTAAAAAGTGGAAGTAGTCGCCAGAACAAGACTAGTGAGGAGATTGAGGATGATCTAAACTCATGTTCTCCTGCTTCATGTATTGATATTGAAAATGGTCCAGGCTCTTTGCTTTCTTTGGCTACTGGAAATGAAGGCAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40020.p1 GENE.S_Transcript_40020~~S_Transcript_40020.p1 ORF type:5prime_partial len:155 (-),score=41.58 S_Transcript_40020:97-561(-)
PPATSHLPDKLILLDWVWDKWKDGVILEVMDQKLRGLYDEMEAMMVLKLGLMCSAELPEDRPTMKQVVRYLEGEADLPEMVATPSRYKDRKSGSSRRNKTSEEIEDDLKSGSSRQNKTSEEIEDDLNSCSPASCIDIENGPGSLLSLATGNEGR*

Click here to download the sequence:
Link to NCBI Protein BLAST