Transcript Information: S_Transcript_40027.p1


Annotated TAIR IDAT5G55670.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22544669-22546801 | Reverse length=710
E-Value6.5E-280
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.426682719948
Replicate 224.073955408336
Replicate 325.443448147988
Condition 2: 8 Hour
Replicate 122.572998186026
Replicate 223.284985318899
Replicate 321.431852217798
Condition 3: 24 Hour
Replicate 126.303022978471
Replicate 224.421413290431
Replicate 324.12394179156


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40027.p1 GENE.S_Transcript_40027~~S_Transcript_40027.p1 ORF type:complete len:735 (+),score=218.77,RRM_1|PF00076.18|4.4e-14,RRM_6|PF14259.2|2.6e-06 S_Transcript_40027:421-2625(+)
ATGGATGAAGCTGAGGGTGTAGGAGGAGGAGGAGGGGGAGGAGATCCGGTGGAGCAGTTCCACCGTAACGAAGCAATATCGGCAGTTACGGATGAGGGTTTCGGTGAAGAAGATGATGATTATGAGGACCTTTATAATGATGTTAATGTTGGGGAAGGGTTTTTGCAATCTTTGAGGAACAAGAATAATAATGAGGATTTGGGGTTTAGGAATGGTAATAATAATGATGAAGAGGCTAGGGCTGAGAACAATCGTCCCCAACAACCTCAGGGTGGTTTGGTGCCGGTGTCGGAGAGTGCGGTAGGGGGGTTGTCGATACCGATACCAGGTGTTGGGAGAGGGGAGGGAGGAGGAGAGAGGAAGTTTGAGGGAGATGTTGGTATGGGTATGGGCCGTGGGTATGGTGGTGGTGGGCCGGTTCAGCCCAATGGAGGTGTTGGTGCTGGGCAGGCAGGGATGGGCCGTGGTTATGGTGGTGGATTGAGGGTTGAGTTAGGGCAGAATTTGAGTAAAGTGAGTGACGTGGAACAGCAGGTGGTTAGTAATATTGTGGTGCCGGGTCAAGGGATGGGGCAGCCTCAGCCTCCTCCTCATGGGGGAACGAATGTTGGAAATGATGGGATGATGAGACAAGGTGGTGGTGGTGGTGGGAGTGTGAATGGGACTGGTGGAAACATACCTGGGACTGGGAGTGGTAGTGCTGCCGTGCAAGTCACGACAATGGGTGGGCCTGGACCCTGTGCGGTTGCAGGGGGTAGTGTTGGTGGTGGAGGTGGGACTGTACTTTTTGTTGGGGATTTACATTGGTGGACCACAGATGCGGAGCTTGAGGCTGAGCTAGTCAAGTATGGGCCAGTCAAGGAGGTGAAGTTCTTTGATGAGAAAGCCAGTGGGAAATCAAAAGGTTACTGTCAGGTTGAGTTTTATGACCCTGGTGTTGCGACAGCTTGTAAGGAAGGGATGAATGGGCATGTTTTCAATGGCCGACCTTGTCTTGTTGCATTTGCGTCTCCGTTTTCTATTAAGAGGATGGGGGAGGCACAGGTAAACAGAAATCAACAGATGGCACAACAATCTCTGTCTCAAGCTAGGAGAGGTCCAAGTGATGCTGGTAATAAACCTACTGGTAATAATATTACAACTGGTGGAAATTACCAAGGTGTGGACCAGAACAGAAATTTCGGAAGAGGTAACTGGGGAAGAGGCAATCCTCAAGGTATGGGCGGTAGAGGTCCAGTTGGTCCCATAAGGAACCGGCCTGGTGGGATGGCTGGGAGAGGTATTATGGGGAATGGTGGCAATGGGTTTGGGCAAGGTATGGGGCCTACTCCTCCAATAATGCCACCTCAGGCCATGATGGGTCAAGGTTTTGACCCAGGTTTTGGAGCACCTATGGGTAGGATGGGCAACTATGGGGGCTTCCCGGGTGCACCTACACCTCCGTTTCAAGGGCTCTTGTCTTCCTTCCCACCTGTGGGAAATGTTGGTTTGCCTGGTGTGGCTCCTCATGTCAACCCTGCCTTCTTTGGGAGAGGTATGCCCATGAGTGGGATGGGAATGATGCCGAATGCTGGCGTTGATGGTCCCAATATGGGAATGTGGTCAGATCCTAGTATGGGTGGATGGGCTGGTGACGAGCATGGTGGGAGAGCTGGGGAGTCCAGCTTCGGGGAGGAAGCTGTGTCTGACCATCAGTATGGAGAGGCTAGTCATGACCGGGGTGGGTGGCAGAATCCCATGAAAGACAAGGATAGAGGTTCAGAGAGGGATTTTTCAGGTTCTTCTGATAGGAGGTACCGTGATGATAGGGAGCCAGGTTATGACAGGGACATGCCTAGGGAAAAAGACATGGGCCATGATCATGACTGGTCAGAGAGAAGGCACCGTGATGACAGAGATGCCCGTGATCGTGAGCGTTCTCGTGACCGCGATCGTGATAGGGAGCGTTCTCGTGACCGTGATCGTGAGCGTTCTCGGGACAGGGATCGTGACCGGGACAGGGACAGGGATCGTTACAGAGAAGACAGAGACAGATATGCTGATCACCATAGGTACAGGGACCGTGAAGCAGACTATGATGATGAATGGGAAAGGGGGCGATCATCAAGGACTCACAGCAAATCTCGTGTGTCCCAAGAAGAAGAGCAGCGATCAAGATCAAGAGATGCTGACTATGGGAAGAGGAGGCGGATAACTTCTGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40027.p1 GENE.S_Transcript_40027~~S_Transcript_40027.p1 ORF type:complete len:735 (+),score=218.77,RRM_1|PF00076.18|4.4e-14,RRM_6|PF14259.2|2.6e-06 S_Transcript_40027:421-2625(+)
MDEAEGVGGGGGGGDPVEQFHRNEAISAVTDEGFGEEDDDYEDLYNDVNVGEGFLQSLRNKNNNEDLGFRNGNNNDEEARAENNRPQQPQGGLVPVSESAVGGLSIPIPGVGRGEGGGERKFEGDVGMGMGRGYGGGGPVQPNGGVGAGQAGMGRGYGGGLRVELGQNLSKVSDVEQQVVSNIVVPGQGMGQPQPPPHGGTNVGNDGMMRQGGGGGGSVNGTGGNIPGTGSGSAAVQVTTMGGPGPCAVAGGSVGGGGGTVLFVGDLHWWTTDAELEAELVKYGPVKEVKFFDEKASGKSKGYCQVEFYDPGVATACKEGMNGHVFNGRPCLVAFASPFSIKRMGEAQVNRNQQMAQQSLSQARRGPSDAGNKPTGNNITTGGNYQGVDQNRNFGRGNWGRGNPQGMGGRGPVGPIRNRPGGMAGRGIMGNGGNGFGQGMGPTPPIMPPQAMMGQGFDPGFGAPMGRMGNYGGFPGAPTPPFQGLLSSFPPVGNVGLPGVAPHVNPAFFGRGMPMSGMGMMPNAGVDGPNMGMWSDPSMGGWAGDEHGGRAGESSFGEEAVSDHQYGEASHDRGGWQNPMKDKDRGSERDFSGSSDRRYRDDREPGYDRDMPREKDMGHDHDWSERRHRDDRDARDRERSRDRDRDRERSRDRDRERSRDRDRDRDRDRDRYREDRDRYADHHRYRDREADYDDEWERGRSSRTHSKSRVSQEEEQRSRSRDADYGKRRRITSE*

Click here to download the sequence:
Link to NCBI Protein BLAST