Transcript Information: S_Transcript_4006.p1


Annotated TAIR IDAT5G27620.1
Annotated Gene Namecyclin H;1
Annotated Gene Symbol(s)CYCH;1
Annotation TypeOrtholog
Chromosome Positionchr5:9771762-9774684 | Forward length=336
E-Value2.9E-104
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.0736071162907
Replicate 29.9158604752876
Replicate 39.2559050007583
Condition 2: 8 Hour
Replicate 19.9039265892303
Replicate 211.144029472223
Replicate 310.378502579204
Condition 3: 24 Hour
Replicate 111.208797895923
Replicate 29.5069172155465
Replicate 310.107710679204


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_4006.p1 GENE.S_Transcript_4006~~S_Transcript_4006.p1 ORF type:complete len:267 (+),score=57.80,Cyclin_C_2|PF16899.1|1.8e+02,Cyclin_C_2|PF16899.1|9.8e-19,Cyclin_N|PF00134.19|1.7e-13,Cyclin_N|PF00134.19|4.6e+03,TFIIB|PF00382.15|2.3e-06 S_Transcript_4006:579-1379(+)
ATGGTTCTACGTGTATTTTACGAGTATAAGATTCAAGTAGTCTGTGGAGCCTTTAAATTCCCACATAAAATTCAGGCTACTGCACTCACATATTACAAAAGGTTTTATCTCTGCTGGTCAGTCATGGAGCACCACCCTAAAACTGTAATGCTAACATGTATATATCTAGCTTGTAAGATAGAGGAAAATCATGTGTCAGCTGAGGAGCTTGGTAAGGGTATCCAGCAGGATCATCGAATGATTCTAGATAACGAGATGCTAGTCCTTCAGAGCTTAGGATTTGATCTCATTATTTATACACCATACCGTTCAATTGATGGATTTATTGATGACATGGAGGATTTTTGCCATGCAACAAATGGCCAGATGGACAAGTTGAAGGAGTTACAACAAGCAGCAATCTTCGAGGCAGATAAGGCAATGCTTACTGATGCACCGCTACTGTTTCCTCCTGGCCAGCTGGCATTAGCTGTTCTTGGTAGGGCGAACGATGAGCTCAAAGTTCTTGATTTTGAGAGATACCTTGGAAGCATTCTTTCACGCCAACAATCTGTGCACTCCATTTCAGAACTAAAACAGGCTTTCACTGCGACAGATCTTTTGATAAAAAGAGTCAAAATTGGTGATGATGAGGAGATGAAACGTATTGCTAAGAAGTTGAAATCTTGTCAGGATGTTGGTTCTCGTGACGATAAGAAGAGGGAGAAGAAATCAAAGCACAAGTCCAAACGAAATCCACATGAAATGCAAACTACACCTGGAGCTGCTGCCGAGCTTGCTTTGGATATAAATGGGAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_4006.p1 GENE.S_Transcript_4006~~S_Transcript_4006.p1 ORF type:complete len:267 (+),score=57.80,Cyclin_C_2|PF16899.1|1.8e+02,Cyclin_C_2|PF16899.1|9.8e-19,Cyclin_N|PF00134.19|1.7e-13,Cyclin_N|PF00134.19|4.6e+03,TFIIB|PF00382.15|2.3e-06 S_Transcript_4006:579-1379(+)
MVLRVFYEYKIQVVCGAFKFPHKIQATALTYYKRFYLCWSVMEHHPKTVMLTCIYLACKIEENHVSAEELGKGIQQDHRMILDNEMLVLQSLGFDLIIYTPYRSIDGFIDDMEDFCHATNGQMDKLKELQQAAIFEADKAMLTDAPLLFPPGQLALAVLGRANDELKVLDFERYLGSILSRQQSVHSISELKQAFTATDLLIKRVKIGDDEEMKRIAKKLKSCQDVGSRDDKKREKKSKHKSKRNPHEMQTTPGAAAELALDINGR*

Click here to download the sequence:
Link to NCBI Protein BLAST