Transcript Information: S_Transcript_400635.p1


Annotated TAIR IDATMG00240.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)ORF111A
Annotation TypeHomolog
Chromosome PositionchrM:68918-69253 | Reverse length=111
E-Value6E-12
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.55960028583574
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_400635.p1 GENE.S_Transcript_400635~~S_Transcript_400635.p1 ORF type:5prime_partial len:81 (-),score=8.18 S_Transcript_400635:468-710(-)
GATTTGTCCTTTACAGTTCAGTTTCTTAGACAGTTTATGCAAGACCCTAGAACTGATCATTTGCAGCCTACCTATTATACTTTACAATATCTGAAGTGTGCTCCTAGTCAAGGACTTTTCCTGAATGCCTCTCCCAATTTTTCTCTCCAAGCCTATTGTGACTCAGACTATGCAGCATGTCCATGTACTAGGATATCAGTCAGTGGTTATTTCATCAATTTGGGTGGTTCTCCTTTGTCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_400635.p1 GENE.S_Transcript_400635~~S_Transcript_400635.p1 ORF type:5prime_partial len:81 (-),score=8.18 S_Transcript_400635:468-710(-)
DLSFTVQFLRQFMQDPRTDHLQPTYYTLQYLKCAPSQGLFLNASPNFSLQAYCDSDYAACPCTRISVSGYFINLGGSPLS*

Click here to download the sequence:
Link to NCBI Protein BLAST