Transcript Information: S_Transcript_400821.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value9E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.3499348452628
Replicate 21.7586281531352
Replicate 31.202787135887
Condition 2: 8 Hour
Replicate 10.92719088335361
Replicate 20.16211484521541
Replicate 31.0812386466295
Condition 3: 24 Hour
Replicate 10.63318502871287
Replicate 21.1496136306843
Replicate 30.5483053131547


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_400821.p3 GENE.S_Transcript_400821~~S_Transcript_400821.p3 ORF type:complete len:138 (+),score=15.43,RVT_1|PF00078.23|3.3e-21 S_Transcript_400821:3520-3933(+)
ATGAAGACTATTGTTGATAATGTCCTGCTAGCACATGAATTAGCTCAACATTATGCTAGGTCCCACATCTTCCCCAGAATTATCATGAAGCTTGATATACAGAAGGCCTATGACACTGTCAGTTGGAAATTAGTTGAAGCCATCCTTTCAGACTTTGGATTCCTTACAAAGTTTAGCAAAAGAATTCTGATGTGTATAACCTCATCAAGATTTTCTATAATTATGAATGGTTGGAATAAGGGGTATTTTCAGGGTCATTGTGGTTTGAGACAAGGTGATCCCCTATCACCCTATCTCTTTGTTTTGTGCATGGAGGCCCTGTCTCGAATGCTGAGGAAGCTTAAATCAACACATGGCTTTTCCTATCATCCTAAGTATGGGAGAGTGGGGCTTATTGTAACGAAACAAGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_400821.p3 GENE.S_Transcript_400821~~S_Transcript_400821.p3 ORF type:complete len:138 (+),score=15.43,RVT_1|PF00078.23|3.3e-21 S_Transcript_400821:3520-3933(+)
MKTIVDNVLLAHELAQHYARSHIFPRIIMKLDIQKAYDTVSWKLVEAILSDFGFLTKFSKRILMCITSSRFSIIMNGWNKGYFQGHCGLRQGDPLSPYLFVLCMEALSRMLRKLKSTHGFSYHPKYGRVGLIVTKQG*

Click here to download the sequence:
Link to NCBI Protein BLAST