Transcript Information: S_Transcript_400832.p2


Annotated TAIR IDAT3G10810.1
Annotated Gene Namezinc finger (C3HC4-type RING finger) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3381848-3384227 | Reverse length=496
E-Value6.5E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.28616130360409
Replicate 20
Replicate 30.19830899014624
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.22920266241915
Condition 3: 24 Hour
Replicate 10.23489122032897
Replicate 20.4873937973408
Replicate 30.54240955709927


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_400832.p2 GENE.S_Transcript_400832~~S_Transcript_400832.p2 ORF type:5prime_partial len:93 (+),score=24.62 S_Transcript_400832:2-280(+)
TCATCACCATCATCAATCTCCTCGTCATCACAACCCACTCCCACTCGCCCCTTCCCTCTCTGTTCTGGCCCGAAAAGAACACCGACACCACCACCATCATCACCATCACCACCATCATCATCACCATCACCACCAACATCATCCTCATCCCCTTTTCCTTGTCAACCACTACCACCACAACTCATCCCCAAAACCCAAGCCCCAGTTCCAATTCAAAAAAATAAAAAAAAAAGAGGGAAGAGAGTGAGAGGAGTGATGCTGAGAGGGGTGGGAGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_400832.p2 GENE.S_Transcript_400832~~S_Transcript_400832.p2 ORF type:5prime_partial len:93 (+),score=24.62 S_Transcript_400832:2-280(+)
SSPSSISSSSQPTPTRPFPLCSGPKRTPTPPPSSPSPPSSSPSPPTSSSSPFPCQPLPPQLIPKTQAPVPIQKNKKKRGKRVRGVMLRGVGD*

Click here to download the sequence:
Link to NCBI Protein BLAST