Transcript Information: S_Transcript_400875.p1


Annotated TAIR IDAT4G12050.1
Annotated Gene NamePredicted AT-hook DNA-binding family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:7220139-7221158 | Reverse length=339
E-Value8.3E-117
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.41196596339289
Replicate 20.27322340009306
Replicate 30.17129476238638
Condition 2: 8 Hour
Replicate 10.72625168262682
Replicate 20.41557613572248
Replicate 30.92390670733665
Condition 3: 24 Hour
Replicate 10.33815609118567
Replicate 20.35083299653789
Replicate 30.39043412391821


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_400875.p1 GENE.S_Transcript_400875~~S_Transcript_400875.p1 ORF type:complete len:323 (+),score=44.95,DUF296|PF03479.11|1.8e-30 S_Transcript_400875:318-1286(+)
ATGGATCCAGTGACAGCACATGGAAGGCCACTCCCACCTCCTTTCCACACAAACCTCCACCTAAACGCCCATCAGTTCCACCACTTTCATCAACAACAGCAGCAGCAACAGAACCACCTTCAGCAACACCAACAACAGCAACAGCAGCAACATATGAGCTCGGAAGCGGAGCAAAGCGGGAGCAGTAGTGACATCAAGCCGAGCCTCAAGAGAGACCGAGATGACTCAGCAGCCGACAGCCGAGACCCCGCCTCCAGCTCGGGAGGAGGTGGCGGCGGTGGAGAAATCCAAAGACGGCCTCGAGGAAGGCCGGCTGGATCGAAGAACAAGCCAAAGCCGCCAATCATAATAACCCGAGACAGTGCCAACGCTCTTCGATCTCACGTCATGGAGGTGGCCAACGGGAGTGACGTCATGGACAGCATCACCAACTTCGCTCGCCGTAGGCAACGAGGGGTTTGTGTCTTGAGCGGGACCGGCACTGTTGCTAACGTCACTCTCCGCCAGCCTGGCGCTCCGGGGGCGGTCGTTACTCTTCATGGAAGGTTCGAAATCCTTTCGTTATCTGGTTCTTTTCTACCGCCCCCGGCCCCACCTGCTGCTTCTGGGTTGTCGATTTATCTGGCTGGAGGGCAAGGGCAGGTGGTCGGGGGCGGGGTCGTGGGGCCCTTGCTAGCTGCGGGTCCCGTAGTCATCATGGCGGCGTCATTTGGTAACGCCGCCTATGAGAGACTACCCCTTGAGGATGATGATGGAGGAGGGGGAGGCCCACCCTTGCCTGGAGTGGCGGGTGGCGGTGGAGGATTAGGGTCACCGTCATCGCAGCCAGGGGTGGCGAAACAGGTCATGGGGGATCCGAGTAATAACGGCGGCGGCGGCGGCGGAGGACTAATGCAAGGGTTGCCACCAAACTTGTTGAATTCATTGCCACCAGAAGCCTTTTGGGGTACTGCTAGACCTCCTTATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_400875.p1 GENE.S_Transcript_400875~~S_Transcript_400875.p1 ORF type:complete len:323 (+),score=44.95,DUF296|PF03479.11|1.8e-30 S_Transcript_400875:318-1286(+)
MDPVTAHGRPLPPPFHTNLHLNAHQFHHFHQQQQQQQNHLQQHQQQQQQQHMSSEAEQSGSSSDIKPSLKRDRDDSAADSRDPASSSGGGGGGGEIQRRPRGRPAGSKNKPKPPIIITRDSANALRSHVMEVANGSDVMDSITNFARRRQRGVCVLSGTGTVANVTLRQPGAPGAVVTLHGRFEILSLSGSFLPPPAPPAASGLSIYLAGGQGQVVGGGVVGPLLAAGPVVIMAASFGNAAYERLPLEDDDGGGGGPPLPGVAGGGGGLGSPSSQPGVAKQVMGDPSNNGGGGGGGLMQGLPPNLLNSLPPEAFWGTARPPY*

Click here to download the sequence:
Link to NCBI Protein BLAST