Transcript Information: S_Transcript_401084.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0645200494072
Replicate 20.52950694938036
Replicate 30.73770944334402
Condition 2: 8 Hour
Replicate 11.3648249802965
Replicate 20.53692436735344
Replicate 30.6821071233594
Condition 3: 24 Hour
Replicate 10.87379533962377
Replicate 21.4504839408862
Replicate 31.4124344866865


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_401084.p1 GENE.S_Transcript_401084~~S_Transcript_401084.p1 ORF type:complete len:125 (+),score=4.76,zf-RVT|PF13966.2|2.8e-06,zf-RVT|PF13966.2|5.5e+02 S_Transcript_401084:272-646(+)
ATGGCTAATAGGTGTGCCCTATGTTACCACAGTCAGGAGTCTGTTAAGCACTTATTTTTTGCCTGCTCTTATGCACAGAAGGTTTGGCGGAATGTTCTGACTTGGTTGAGAATTTATAGAAGAAATTTGAGCCTTAAAAGTGAACTAAAATGGTTCTATAAGCATGTTAGGGGCAAAAGCTGGGTCAAGAAGCACAGGAGGGGTGCACTTGTAGCTACACTGTATGAAGTATGGAGAGAACGGAACTGCAGGATTTTCCAGGGGAAGCAATATACTGTGCAGCACTGCTTTAATCAGATCCAATATATGGTCTCAGTAAGGATGTTGAGTTTTGAAGATCAAGATCATGATAATATAACTAGCTACTTACTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_401084.p1 GENE.S_Transcript_401084~~S_Transcript_401084.p1 ORF type:complete len:125 (+),score=4.76,zf-RVT|PF13966.2|2.8e-06,zf-RVT|PF13966.2|5.5e+02 S_Transcript_401084:272-646(+)
MANRCALCYHSQESVKHLFFACSYAQKVWRNVLTWLRIYRRNLSLKSELKWFYKHVRGKSWVKKHRRGALVATLYEVWRERNCRIFQGKQYTVQHCFNQIQYMVSVRMLSFEDQDHDNITSYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST