Transcript Information: S_Transcript_401085.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value7E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.16227439777549
Replicate 20.40358761385698
Replicate 30.22491141565366
Condition 2: 8 Hour
Replicate 10.1300328677874
Replicate 20.27282742243569
Replicate 30.12997468051818
Condition 3: 24 Hour
Replicate 10
Replicate 20.27638794605302
Replicate 30.61517181475893


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_401085.p1 GENE.S_Transcript_401085~~S_Transcript_401085.p1 ORF type:complete len:164 (+),score=20.18,RVT_1|PF00078.23|7e-28 S_Transcript_401085:917-1408(+)
ATGAAAATAGACATAAAGAAGGCCTATGATACTCTGAATTGGGATTTCATTATAAATGTTCTTTGTCATCTTGGTTTCCCCCCTCAATTTATAAGCTGGATTATGGAGTGTGTGACTACTTCCAAGTTCTCTGTGAATATTAATGAAAGTTCTAAGGGTTACTTTGAGGGTAAGTGTGGTCTGAGGCAAGGTGACCCTATATCACCTTATTTGTTTGTCATCTGTATGGAAGGGTTGTCAAGAATCTTGAGGAAAATCTCAACTGTTAAGGGATTTTCATTTCACCCCAAGACTATGAAAGTGAGATTTAATCATCTCATATTTGCTGATGACCTACTTATCTTCACTAAAGGTGATGTTCCATCAATTGATCTTGTGTTGAAAGGGATGCAAAGATTTTCTCAAATGTTTGGATTGCATATTTTTTTTTTGACTGGATGTTTGGATTGCATGTTAATTCTGATAAAACTGAAATTTACATGGGTGGTGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_401085.p1 GENE.S_Transcript_401085~~S_Transcript_401085.p1 ORF type:complete len:164 (+),score=20.18,RVT_1|PF00078.23|7e-28 S_Transcript_401085:917-1408(+)
MKIDIKKAYDTLNWDFIINVLCHLGFPPQFISWIMECVTTSKFSVNINESSKGYFEGKCGLRQGDPISPYLFVICMEGLSRILRKISTVKGFSFHPKTMKVRFNHLIFADDLLIFTKGDVPSIDLVLKGMQRFSQMFGLHIFFLTGCLDCMLILIKLKFTWVV*

Click here to download the sequence:
Link to NCBI Protein BLAST