Transcript Information: S_Transcript_401087.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value2E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.48387274973055
Replicate 20.8022832566369
Replicate 30.73770944334402
Condition 2: 8 Hour
Replicate 11.0856562343268
Replicate 21.0575782993325
Replicate 30.31004869243609
Condition 3: 24 Hour
Replicate 11.5092828593501
Replicate 21.4010356247197
Replicate 31.1923148264237


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_401087.p1 GENE.S_Transcript_401087~~S_Transcript_401087.p1 ORF type:complete len:275 (+),score=43.48,RVT_1|PF00078.23|1.9e-17,RVT_1|PF00078.23|5.6e+03 S_Transcript_401087:794-1618(+)
ATGGAATGTGTGTCAACTTCCAAGTTTCCTGTGAATATTAATGGGAGTCCGAAGGGTTATTTTGATGCGAAATGTGGGCTAAGGCAAGGTGACCCTATATCACCCTATTTGTTTGTTATCTGTATGAAAGGATTGTCTCGAATCTTGAGGAAATTTTCAAATGTCAAAGGATTTTCTTTTCACCCTAAGACAGTGAGAGTGAGATTTAATCATCTTATTTTTGCTGATGACCTGCTCATATTCACCAGAGGTGATGTTCCTTCTATTGATCTTGTTCTGAAAGGGATGAAAAGCTTTTCTCAAATGTCTGTCCTGCATATTGACTCTGATAAAACTGATATTTACATGGGAGGTGTGGAGTTGGGAGTTCAGCAGCAGATTTTATCTATATCAGGCTTTAAACAAGGAGCCTTGCCTGTTAGATATTTAGGAATGCCATTGAGTTCAGTGGGGATTTCTCATGATATGTGCCAAAGTTTGTTGGACAAGATAAGGAAAAAATTGAATCACTGGGGGCTGTGTACTCTTTCTCATGCTGGTAGGCTTGAACTACTAAATTCAGTTTTGTTTGGAATTGAAACTTTCTGGTGCTCAGCTTTCTTACTTCCAAAGAAGACCCAATTGGCAATTGAGAAATTATGCAGGCAAGTTTTATGGGGAATAAGGGAGAATGAGAGAAGGATGATCTTCATGTCATGGCACAACCTTAGTAAGGATAAGAATCAAGGAGGGCTGAATATAAAAGTTCTAAGCTGGAACAAAACTATTATTTTGAAATGGTTGGCCAAATTACAGATTACTGGCAGCACTTTATGGAGCGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_401087.p1 GENE.S_Transcript_401087~~S_Transcript_401087.p1 ORF type:complete len:275 (+),score=43.48,RVT_1|PF00078.23|1.9e-17,RVT_1|PF00078.23|5.6e+03 S_Transcript_401087:794-1618(+)
MECVSTSKFPVNINGSPKGYFDAKCGLRQGDPISPYLFVICMKGLSRILRKFSNVKGFSFHPKTVRVRFNHLIFADDLLIFTRGDVPSIDLVLKGMKSFSQMSVLHIDSDKTDIYMGGVELGVQQQILSISGFKQGALPVRYLGMPLSSVGISHDMCQSLLDKIRKKLNHWGLCTLSHAGRLELLNSVLFGIETFWCSAFLLPKKTQLAIEKLCRQVLWGIRENERRMIFMSWHNLSKDKNQGGLNIKVLSWNKTIILKWLAKLQITGSTLWSD*

Click here to download the sequence:
Link to NCBI Protein BLAST