Transcript Information: S_Transcript_401088.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21994215896843
Replicate 20.18233710378111
Replicate 30.15241930647604
Condition 2: 8 Hour
Replicate 11.4099431614633
Replicate 20.18489131107212
Replicate 30.88082014896617
Condition 3: 24 Hour
Replicate 10.72214490877997
Replicate 20.93652113951849
Replicate 31.4591265358332


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_401088.p1 GENE.S_Transcript_401088~~S_Transcript_401088.p1 ORF type:internal len:121 (-),score=18.41,zf-RVT|PF13966.2|1.4e+03,zf-RVT|PF13966.2|2.9e-16 S_Transcript_401088:2-361(-)
CTGAAAGACAAATCTATATGGGAGATTCAGCCACGACAAGTAGATTCTTGGGCTTGGAGGAGAATGCTCTATGTAAGAGATGAGTTCTTGGCCCAAGCAAATCAGAATGAAATTGCTGATACTATACAGAGGTGGGAAATGCAGGAAAAGACAGTCTGGGATAATGCCAACATGCCAAAACATTCAACCATTACTGTTATGGCTATTGCAAATGGACAACCAACACAAGACAAGCTAATCAGAAGAGGCGTGCAGATGGCTAATAGATGTATCCTATGCAGATGTCACCAGGAATCTGTAGAGCATTTATTCTTTGCTTGTCCTTTTGTAAAACATGTCTGGAGAGGGATTTTAAACTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_401088.p1 GENE.S_Transcript_401088~~S_Transcript_401088.p1 ORF type:internal len:121 (-),score=18.41,zf-RVT|PF13966.2|1.4e+03,zf-RVT|PF13966.2|2.9e-16 S_Transcript_401088:2-361(-)
LKDKSIWEIQPRQVDSWAWRRMLYVRDEFLAQANQNEIADTIQRWEMQEKTVWDNANMPKHSTITVMAIANGQPTQDKLIRRGVQMANRCILCRCHQESVEHLFFACPFVKHVWRGILNW

Click here to download the sequence:
Link to NCBI Protein BLAST