Transcript Information: S_Transcript_401094.p3


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value6E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16588563577079
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.16820938826862
Replicate 30
Condition 3: 24 Hour
Replicate 10.16424724429018
Replicate 20
Replicate 31.8963943161741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_401094.p3 GENE.S_Transcript_401094~~S_Transcript_401094.p3 ORF type:3prime_partial len:133 (+),score=9.15,zf-RVT|PF13966.2|3.7e-16 S_Transcript_401094:3678-4073(+)
ATGCTCTATGTAAGAGATGAGTTCTTGGCCCAAGCAAATCAGAATGAAATTGCTGATACTATACAGAGGTGGGAAATGCAGGAAAAGACAGTCTGGGATAATGCCAACATGCCAAAACATTCAACCATTACTGTTATGGCTATTGCAAATGGACAACCAACACAAGACAAGCTAATCAGAAGAGGCGTGCAGATGGCTAATAGATGTATCCTATGCAGATGTCACCAGGAATCTGTAGAGCATTTATTCTTTGCTTGTCCTTTTGTAAAACATGTCTGGAGAGGGATTTTAAACTGGCTACATATCTACAGGAGAAGCCTAAGTCTCAAACGTGAATTAAAATGGTTCACAAACAGTTTGAGTATCACTGTTAATATTTTACACCCTTTCACAATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_401094.p3 GENE.S_Transcript_401094~~S_Transcript_401094.p3 ORF type:3prime_partial len:133 (+),score=9.15,zf-RVT|PF13966.2|3.7e-16 S_Transcript_401094:3678-4073(+)
MLYVRDEFLAQANQNEIADTIQRWEMQEKTVWDNANMPKHSTITVMAIANGQPTQDKLIRRGVQMANRCILCRCHQESVEHLFFACPFVKHVWRGILNWLHIYRRSLSLKRELKWFTNSLSITVNILHPFTI

Click here to download the sequence:
Link to NCBI Protein BLAST