Transcript Information: S_Transcript_40113.p1


Annotated TAIR IDAT1G16700.1
Annotated Gene NameAlpha-helical ferredoxin
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5710012-5711694 | Forward length=222
E-Value9E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1169.79335629685
Replicate 2159.3312766235
Replicate 3144.70454465594
Condition 2: 8 Hour
Replicate 1186.52479404081
Replicate 2186.46581535917
Replicate 3172.84162401867
Condition 3: 24 Hour
Replicate 1162.40336459297
Replicate 2166.33801980468
Replicate 3177.80970671118


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40113.p1 GENE.S_Transcript_40113~~S_Transcript_40113.p1 ORF type:complete len:221 (+),score=51.28,Fer4|PF00037.23|2.1e-05,Fer4|PF00037.23|1.6e-08,Fer4_7|PF12838.3|8.3e-13,Fer4_16|PF13484.2|0.00086,Fer4_16|PF13484.2|3.1e-05,Fer4_10|PF13237.2|4.8e-08,Fer4_10|PF13237.2|0.0023,Fer4_21|PF14697.2|0.00027,Fer4_21|PF14697.2|6.5e-06,Fer4_21|PF14697.2|0.0094,Fer4_9|PF13187.2|4.3e-09,Fer4_8|PF13183.2|1.4e+04,Fer4_8|PF13183.2|0.00013,Fer4_8|PF13183.2|0.00034,Fer4_2|PF12797.3|0.0061,Fer4_2|PF12797.3|0.0007,Fer4_6|PF12837.3|0.00036,Fer4_6|PF12837.3|0.01,Fer4_4|PF12800.3|0.00062,Fer4_4|PF12800.3|0.12 S_Transcript_40113:189-851(+)
ATGGCGGCAATCTTTGGTCGAAGGTCTCTCCTTGCTCTTCGCTCTAGCCAACTCGCTTTGACTGGGAAAGGATCCACCCTTGGGACTAGATCTTTTGCCACCAAACATTCATTTTCCACCGATAAAGATGATGAAGAAAGAGAAAAGCTTGCAAGGGAGATCTCAAAGGATTGGAGTTCTGTTTTTGAGAGAAGCATAAATACTTTGTTTCTCACTGAGATGGTTCGAGGTTTGTCACTGACTTTCAAGTACTTCTTTGAACCAAAAGTTACTATCAATTACCCATTTGAAAAAGGCCCTTTGAGCCCTCGTTTCCGTGGTGAGCATGCCCTGCGTCGCTATCCAACTGGAGAAGAACGTTGCATAGCCTGCAAATTGTGTGAAGCTATATGCCCGGCACAAGCAATTACTATTGAGGCCGAGGAAAGGGAAGATGGAAGCCGTAGGACAACCAGGTATGACATTGACATGACAAAGTGCATCTACTGTGGATTCTGCCAAGAGGCATGTCCTGTTGATGCCATTGTTGAAGGACCAAACTTTGAATTTGCGACAGAAACTCATGAGGAGCTTCTCTATGACAAGGAGAAGCTGCTCGAGAATGGGGACCGATGGGAAACTGAGATTGCAGAGAACTTGAGATCTGAGAGCTTGTATCGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40113.p1 GENE.S_Transcript_40113~~S_Transcript_40113.p1 ORF type:complete len:221 (+),score=51.28,Fer4|PF00037.23|2.1e-05,Fer4|PF00037.23|1.6e-08,Fer4_7|PF12838.3|8.3e-13,Fer4_16|PF13484.2|0.00086,Fer4_16|PF13484.2|3.1e-05,Fer4_10|PF13237.2|4.8e-08,Fer4_10|PF13237.2|0.0023,Fer4_21|PF14697.2|0.00027,Fer4_21|PF14697.2|6.5e-06,Fer4_21|PF14697.2|0.0094,Fer4_9|PF13187.2|4.3e-09,Fer4_8|PF13183.2|1.4e+04,Fer4_8|PF13183.2|0.00013,Fer4_8|PF13183.2|0.00034,Fer4_2|PF12797.3|0.0061,Fer4_2|PF12797.3|0.0007,Fer4_6|PF12837.3|0.00036,Fer4_6|PF12837.3|0.01,Fer4_4|PF12800.3|0.00062,Fer4_4|PF12800.3|0.12 S_Transcript_40113:189-851(+)
MAAIFGRRSLLALRSSQLALTGKGSTLGTRSFATKHSFSTDKDDEEREKLAREISKDWSSVFERSINTLFLTEMVRGLSLTFKYFFEPKVTINYPFEKGPLSPRFRGEHALRRYPTGEERCIACKLCEAICPAQAITIEAEEREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAIVEGPNFEFATETHEELLYDKEKLLENGDRWETEIAENLRSESLYR*

Click here to download the sequence:
Link to NCBI Protein BLAST