Transcript Information: S_Transcript_401634.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.11158491083933
Replicate 20.092506455167777
Replicate 30
Condition 2: 8 Hour
Replicate 10.67060975840041
Replicate 20.42211035169296
Replicate 30.44687311540841
Condition 3: 24 Hour
Replicate 10.18318560579115
Replicate 20.28507939089745
Replicate 30.10575280673005


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_401634.p1 GENE.S_Transcript_401634~~S_Transcript_401634.p1 ORF type:5prime_partial len:477 (+),score=46.49,RVT_3|PF13456.2|5.3e-18,zf-RVT|PF13966.2|3.9e-17,zf-RVT|PF13966.2|4.6e+03 S_Transcript_401634:3-1433(+)
TGCGGCAACCGCTGCGACGTCGACATGTTTCAAGCACGTCAGCATCAGTCCAATGCCTGGAAAGGCATGGTGGCGGCTTCCCCTTGCCTACGGTCAGGAATAAAGTCAGTGGTGGGGGATGGTACTAGGACTTTCTTTTGGCTTCATAACTGGGCAACCAATAAACCTTTGGAACAATTAGCTTTGCAGACTCTTGATGACAACACTCTATGTCGTACGGTAGCAGAGTATTGGGATGGAGAAAGGTGGAAATGGGACCTTTTTGCACACCTACTCCCTGCTGACACACTCCAAATGATCGCTGCCCACTCATTGCAACATGAATACCCGGCCGTGGATAGACTTTCCTGGGGCCATACATCCACGGGGGAGTTCTCAGCTAAGTCCGCCATGGAAATAGTGAGAGGCTCAACACATGAGGAGCCACATACCAACTGGAAGAGAGTTTGGAGGGTAGCAGCCTCACAAAGGGTTAGAACTTTTCTTTGGTTAGCATTACATGACAGCTTTCTAAGCAATGCGAATAGAGTTCGAAGGCACCTTGCCAGTGATGCTTCATGTACTGCTTGTGGCGAGAGAGACGAGATAGGCCTCCACATCTTGCGGGACTGCCCCTTGGCCAAAGAAGTTTGGGACCCTATCATCCCTTATCATCAAGCAGTAAACTTCTATGATCGCTCTCTAACTGATTGGATAATGGAGAATATTGCTGAGTTGAATGAATGGGCAACTATCTTTTCAACCACACTTTGGTGGCTATGGCGGAGGAATGCCAGGGTACTAGGAGATGCGCGTTCTATACCTCCACAGAGACACATTTTTGTAACTCAACAAGGTCAGGAATACCTCGAGGCCGAATCTAGGAGGAAGTCTCATCTCAACGACACCATAATTGAAAAGCAAGAGGTTAGTATTGCATGGCAGACACCACCAGATGGGTGGGTGAAACTCAACACTGATGGGGCGGCGAAAAGAAATCCTGGATTTGCAGGATGCGGGGGTATTCTACGCTCTCCCCTAGGAGCGTTCATTCGGGCCTTTGCACTCAAGTTGGGTAGGACCACGGCCCTGCATGCAGAACTCCAGGCGATATACCAAGGACTACGAATGGCCAGAAGATTGCAAATACCTCAACTGATTGTGGAAGTTGACTCTGAAGTGGCTCTGTGTATGCTCCGGGCCGATGTACCTGATCACTGCCCCTACTACTATCTTCTATGGAATTGCAAGGATCTAATAAACCAAGATAATTGGACTGTCAAACTCCACCATATTTATCGTGAAGCAAATTGTGCAGCGGATTGGTTCGCAAATTGGAGCTTCGCCCTAGCACAGAATCTGGAAGAATTTGCCTCCCCCCCTCCTGGTGCTGTTAGTGTCTTGTTTAAGGGCTTGCTAGGGAGAGGCCAAACTCGTTTAGTTTCCATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_401634.p1 GENE.S_Transcript_401634~~S_Transcript_401634.p1 ORF type:5prime_partial len:477 (+),score=46.49,RVT_3|PF13456.2|5.3e-18,zf-RVT|PF13966.2|3.9e-17,zf-RVT|PF13966.2|4.6e+03 S_Transcript_401634:3-1433(+)
CGNRCDVDMFQARQHQSNAWKGMVAASPCLRSGIKSVVGDGTRTFFWLHNWATNKPLEQLALQTLDDNTLCRTVAEYWDGERWKWDLFAHLLPADTLQMIAAHSLQHEYPAVDRLSWGHTSTGEFSAKSAMEIVRGSTHEEPHTNWKRVWRVAASQRVRTFLWLALHDSFLSNANRVRRHLASDASCTACGERDEIGLHILRDCPLAKEVWDPIIPYHQAVNFYDRSLTDWIMENIAELNEWATIFSTTLWWLWRRNARVLGDARSIPPQRHIFVTQQGQEYLEAESRRKSHLNDTIIEKQEVSIAWQTPPDGWVKLNTDGAAKRNPGFAGCGGILRSPLGAFIRAFALKLGRTTALHAELQAIYQGLRMARRLQIPQLIVEVDSEVALCMLRADVPDHCPYYYLLWNCKDLINQDNWTVKLHHIYREANCAADWFANWSFALAQNLEEFASPPPGAVSVLFKGLLGRGQTRLVSM*

Click here to download the sequence:
Link to NCBI Protein BLAST