Transcript Information: S_Transcript_402300.p1


Annotated TAIR IDAT5G66330.1
Annotated Gene NameLeucine-rich repeat (LRR) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:26500531-26501787 | Reverse length=418
E-Value5.2E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6227439777549
Replicate 20.87443983002345
Replicate 31.0121013704415
Condition 2: 8 Hour
Replicate 11.6904272812362
Replicate 20.47744798926246
Replicate 31.7546581869954
Condition 3: 24 Hour
Replicate 10.39960152726697
Replicate 20.82916383815905
Replicate 30.99965419898326


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_402300.p1 GENE.S_Transcript_402300~~S_Transcript_402300.p1 ORF type:5prime_partial len:328 (+),score=27.76,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|1e-08,LRR_8|PF13855.2|2.3e-06,LRR_8|PF13855.2|0.00053,LRR_4|PF12799.3|0.62,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|1.5e+02,LRR_1|PF00560.29|0.44,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|44,LRR_1|PF00560.29|34,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|3.1,LRR_1|PF00560.29|52,LRR_1|PF00560.29|70,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|7.2e+03,LRR_1|PF00560.29|8.9e+03 S_Transcript_402300:3-986(+)
GGTTATGCTGGTTCACTTTCTTCTGCTTCTTTCAACCTCCCTCTCCTACGCTCCCTCACTCTTTCCGGCAACAACTTCTCCGGTCCCATCCCTGACTCGCTCTCCAAGTTAACTCGCCTTCAACGACTCATCCTTTCCATCAACTCGTTCTCTGGCCCCATCCCTGCCTCACTGGGTCAACTCGGCTCCCTTCAGGAGCTCGCCCTCGATAACAACGCCCTTGCGGGTCCCATCCCTGCTAGCTTTTCTGGGCTGGTCAGCTTGCAACGGCTGGAAATTCAGGGGAATCAACTCGGTGGCGGGTTCCCTGACCTGAGTCAACTCAGTAGAATCAACTTCCTTGATTGCAGTGACAATTCCATCTCCGGCGAGTTTCCGACGAATTTACCGGCTTCATTGGTGGAGATATCGATGAGGGACAACAACTTGGGAGGAAACCTACCTGCTGGTATACAAAAGTTAGGATCTTTACAAGTTTTGGACCTGACTCGGAACCAACTCAGTGGGTCAGTCCCGGTGAGTTTGTTCAGTCACCAGAGTCTACAGCAACTTTCTCTCTCCGACAATAACCTCAGCTCCATCGAGGTGCCGGGCAATTTGGGCACACAATCCGAGCTGATAGCCATTGACTTGAGTAGCAACCAATTTGGTGGGCTTTTGCCGGGGTTTTTGGGCTTAATGCCAAAATTTTCAGCTTTATCCCTTGAGAAGAACAAGTTTACGGGTATGATTCCCATTCAATATGCTTTGAAAACGGTTTTACCCGGACCCGGAATGGCCCCGTTTGAGAGGCTGCTATTGGGTGCAAATTTCTTATTCGGGCCCATACCCGACCCGCTAGTGAGGATGGAACCTGGTTCGGCCAATGTGAATTTAGTGGATAATTGTTTGTTTGTGTGCCCAAACACGCTCTTCTTTTGCCAAGGAGGTGACCAAAAATCATTAGTTGAGTGTAGGAACACAATTGGGCCTATTATTCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_402300.p1 GENE.S_Transcript_402300~~S_Transcript_402300.p1 ORF type:5prime_partial len:328 (+),score=27.76,LRR_8|PF13855.2|0.00021,LRR_8|PF13855.2|1e-08,LRR_8|PF13855.2|2.3e-06,LRR_8|PF13855.2|0.00053,LRR_4|PF12799.3|0.62,LRR_4|PF12799.3|0.33,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|0.056,LRR_4|PF12799.3|0.12,LRR_4|PF12799.3|1.3,LRR_4|PF12799.3|0.26,LRR_4|PF12799.3|1.1,LRR_4|PF12799.3|1.5e+02,LRR_1|PF00560.29|0.44,LRR_1|PF00560.29|2.4e+02,LRR_1|PF00560.29|44,LRR_1|PF00560.29|34,LRR_1|PF00560.29|3.7e+02,LRR_1|PF00560.29|3.1,LRR_1|PF00560.29|52,LRR_1|PF00560.29|70,LRR_1|PF00560.29|1.6e+04,LRR_1|PF00560.29|7.2e+03,LRR_1|PF00560.29|8.9e+03 S_Transcript_402300:3-986(+)
GYAGSLSSASFNLPLLRSLTLSGNNFSGPIPDSLSKLTRLQRLILSINSFSGPIPASLGQLGSLQELALDNNALAGPIPASFSGLVSLQRLEIQGNQLGGGFPDLSQLSRINFLDCSDNSISGEFPTNLPASLVEISMRDNNLGGNLPAGIQKLGSLQVLDLTRNQLSGSVPVSLFSHQSLQQLSLSDNNLSSIEVPGNLGTQSELIAIDLSSNQFGGLLPGFLGLMPKFSALSLEKNKFTGMIPIQYALKTVLPGPGMAPFERLLLGANFLFGPIPDPLVRMEPGSANVNLVDNCLFVCPNTLFFCQGGDQKSLVECRNTIGPIIP*

Click here to download the sequence:
Link to NCBI Protein BLAST