Transcript Information: S_Transcript_40231.p1


Annotated TAIR IDAT1G04080.3
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)PRP39
Annotation TypeOrtholog
Chromosome Positionchr1:1051803-1056550 | Forward length=823
E-Value1.4E-155
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 130.189123276158
Replicate 236.50702209595
Replicate 339.277264503043
Condition 2: 8 Hour
Replicate 143.583766460641
Replicate 241.982172212987
Replicate 341.332760746534
Condition 3: 24 Hour
Replicate 138.808800826259
Replicate 232.331343701883
Replicate 332.985704948566


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40231.p1 GENE.S_Transcript_40231~~S_Transcript_40231.p1 ORF type:3prime_partial len:640 (+),score=156.65,TPR_14|PF13428.2|3.1,TPR_14|PF13428.2|28,TPR_14|PF13428.2|6.1e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|0.74,TPR_14|PF13428.2|5.8,TPR_14|PF13428.2|6.3e+02,TPR_14|PF13428.2|38,TPR_14|PF13428.2|1.7e+02 S_Transcript_40231:368-2284(+)
ATGGGTGAGAGTGAGGCAGTAGTTGCTCAATCATCTACTGTTGTGGGCTATACGTCTGCAGGTTATCATTCTGGTGATTATAATATGGACGGTAACCCAAATGCTACCAATGCTGCTGAAGTTGCTGCAACAAGTACTGTGCCTGCTGGAGATTCAGCTGATGCCATGTCTGTAGCAGTTCAGAGCAGTAATTCTGATGCTGGAGCTCCACAGATTGATAAAAGTTCTGCTGCCCCAGACGGTCCTGTTGCTTCCAATGAGGAAACTAGGCCTCCTGTTACAGGAGAAGACAGTAACCAGGCTACCGCAGGAGGTGAAAGCACATCTGTGGAATCGAGTCAAGCAGCTGTTTATGATGCTAGTGCAAATGGAATTGTTAGTGATGCAAATGGCAATATTACTACTTCTCATGATGCACAAGCCACAACCACTGAGCAACAGTTTGAGGATGGTACAGTGTTATCTGCCGAAGAAGAGCGTTTATGGAGCATTGTAAAAGCAAATTCTTTAGACTTCAATGCATGGACATCATTAATTGAAGAGACAGAGAAGACGTCACAGGACAATATTTTGAAAATTAGGAAAGTATATGATGCCTTTTTAGCAGAGTTCCCTTTGTGTTATGGTTATTGGAAGAAATATGCTGATCATGAAGCTCGTTTTGGAGCTATTGACAAAGTTGTAGAGGTCTATGAGCGAGCAGTTCAAGGGGTCACATATTCTGTGGATATCTGGTTGCATTACTGTGGGTTTGCTATTAACACATATGGAGACCCAGACACTATAAGAAGGCTGTTCGAGCGTGCATTGGCATATGTTGGAACAGATTACCTGTCTAATACCCTCTGGGATAAGTACATTGAATATGAATACACACAGCAGGAATGGGGACGTCTTGCCATGATATATACAAGGATATTAGAAAATCCTATTCAGCAGTTTGATCGTTATTTTAATAGTTTCAAGGAGCTAGCTGGAAGTCAACCCCTGGCAACACTAAGAACTGCCGAAGAAGCAGCGGCAGCTGCTGTTCCTGCTGCAGGCTCGGATGCAGACGGCCAAGTACCTGAAAAGGAGGTTAACTCTGATGCGATGAACGAATCGTCTAACTCTGTAGGTACTGGTTTGTCAGAAGCAGAAGAGTTGGAGAAGTATATCGCCGTTAGAGAAGAGATGTATACGAGAGCTAAGGAGTTCGAATCTAAGATCAGTGGTTTTGAAACAGCTATTAGACGGCCATACTTCCATGTACGGCCCTTGAATGACTCAGAGCTAGAAAATTGGCATAGCTACCTGGATTTCATTGAAAGCGACGGGGACTTCAACAAGATTGTCAAGCTATACGAAAGATGCCTAGTAGCATGTGCTAACTATCCTGAGTTCTGGATAAGATACATCTTATGCATGGAAGCAAGTGGGAGCAGTGAACTTGCTGAAAATGCTCTTGCGCGTGCTACCCGAGTATTTGTAAAGAGGCAACCTGAGATCCACCTTTTTGCTGCTCGCTACAAAGAGCAGCATGAAGATATTTCTGGAGCTCGTGCTGCTTATCAGCTTGTACATACTGAGATTTCTCCTGGGCTTCTTGAGGCTATCATTGATCATGCAAATATGGAAAGGCGGCTGGGAACCGTGGAAGATGCTTTCTCTTTATATGAACAAGCTATTGCCATAGAAAAAGGGAAAGAGCAATCACAGACACTACCAATGCTGTTTGCCCAATATTCTCGGTTTGTATACCTGGCCTGTGGAAATGCAGAAAAGGCTCGTGATATTCTTGTTGGAGCGCTTGAGCATGTCCAGCTTTCAAAGCCTCTTCTGGAGGCTCTAATTCATCTAGAATCTATCCAATCCCTTCCTAAGCGAATTGAGTATATAGATTCTTTAATTGAGAAGTTCATTAATCTGGAGGCTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40231.p1 GENE.S_Transcript_40231~~S_Transcript_40231.p1 ORF type:3prime_partial len:640 (+),score=156.65,TPR_14|PF13428.2|3.1,TPR_14|PF13428.2|28,TPR_14|PF13428.2|6.1e+03,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|0.74,TPR_14|PF13428.2|5.8,TPR_14|PF13428.2|6.3e+02,TPR_14|PF13428.2|38,TPR_14|PF13428.2|1.7e+02 S_Transcript_40231:368-2284(+)
MGESEAVVAQSSTVVGYTSAGYHSGDYNMDGNPNATNAAEVAATSTVPAGDSADAMSVAVQSSNSDAGAPQIDKSSAAPDGPVASNEETRPPVTGEDSNQATAGGESTSVESSQAAVYDASANGIVSDANGNITTSHDAQATTTEQQFEDGTVLSAEEERLWSIVKANSLDFNAWTSLIEETEKTSQDNILKIRKVYDAFLAEFPLCYGYWKKYADHEARFGAIDKVVEVYERAVQGVTYSVDIWLHYCGFAINTYGDPDTIRRLFERALAYVGTDYLSNTLWDKYIEYEYTQQEWGRLAMIYTRILENPIQQFDRYFNSFKELAGSQPLATLRTAEEAAAAAVPAAGSDADGQVPEKEVNSDAMNESSNSVGTGLSEAEELEKYIAVREEMYTRAKEFESKISGFETAIRRPYFHVRPLNDSELENWHSYLDFIESDGDFNKIVKLYERCLVACANYPEFWIRYILCMEASGSSELAENALARATRVFVKRQPEIHLFAARYKEQHEDISGARAAYQLVHTEISPGLLEAIIDHANMERRLGTVEDAFSLYEQAIAIEKGKEQSQTLPMLFAQYSRFVYLACGNAEKARDILVGALEHVQLSKPLLEALIHLESIQSLPKRIEYIDSLIEKFINLEAD

Click here to download the sequence:
Link to NCBI Protein BLAST