Transcript Information: S_Transcript_402578.p1


Annotated TAIR IDAT3G11940.1
Annotated Gene Nameribosomal protein 5A
Annotated Gene Symbol(s)ATRPS5A, AML1, RPS5A
Annotation TypeOrtholog
Chromosome Positionchr3:3778175-3779354 | Reverse length=207
E-Value4.1E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.81634973114051
Replicate 20.27070907432533
Replicate 30.22629124028958
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.65386035598102
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.15473646874304


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_402578.p1 GENE.S_Transcript_402578~~S_Transcript_402578.p1 ORF type:internal len:163 (+),score=18.51,Ribosomal_S7|PF00177.17|2.1e-24 S_Transcript_402578:3-488(+)
GCAGTTGAAGTTGTACCAAATGAAATCAAACTTTTTGGAAAATGGACATATGAAGATGTTGAAGTCTCAGAAATTGCTTTGAAAGACTACGTCACTGTTAAATCAAAAGCCAACTTTTTACCACACACTGCTGGTAGATATAACGTTAAACGATTCAGAAAGGCCACTTGCCCAATTGTGGAACGAATGGTTAACTCGCTTATGATGCACGGTAGAAATAATGGAAAGAAACTCATGGCCGTCAGAATTATGAAACATACCTTTGATATCATCCACTTACTTACTGATAAAAACCCACTCCAAGTTTTAGTTGATGCTGTCATTAACTCAGGACCACGAGAAGACTCCACTCGAGTTGGTACTGGTGGAACTGCAAGAAGACAAGCAGTCGATGTCTCACCAATCAGAAGAGTAAACTACGCTATCTACACCCTCACCACCGGTGCTAGAAAATCAGCTTTCAGAAACATCAAAACTATCTCTGAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_402578.p1 GENE.S_Transcript_402578~~S_Transcript_402578.p1 ORF type:internal len:163 (+),score=18.51,Ribosomal_S7|PF00177.17|2.1e-24 S_Transcript_402578:3-488(+)
AVEVVPNEIKLFGKWTYEDVEVSEIALKDYVTVKSKANFLPHTAGRYNVKRFRKATCPIVERMVNSLMMHGRNNGKKLMAVRIMKHTFDIIHLLTDKNPLQVLVDAVINSGPREDSTRVGTGGTARRQAVDVSPIRRVNYAIYTLTTGARKSAFRNIKTISE

Click here to download the sequence:
Link to NCBI Protein BLAST