Transcript Information: S_Transcript_402939.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value4E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0235769705839
Replicate 20.2121422072838
Replicate 31.4186720064308
Condition 2: 8 Hour
Replicate 11.2303109798346
Replicate 21.0755696461407
Replicate 31.2297604387489
Condition 3: 24 Hour
Replicate 11.0502347832016
Replicate 21.5254488561003
Replicate 31.2125982887075


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_402939.p1 GENE.S_Transcript_402939~~S_Transcript_402939.p1 ORF type:5prime_partial len:104 (+),score=5.84 S_Transcript_402939:3-314(+)
CATTTATTAGTGACCAATTATGGTTTACAATCAACTAGGGCCATGCATGCACATGAGGCATTAGCTATGTTTTTATGGGTTTGTGCACATGGACACTCAAATCGTAATGTCCAATCTAGATTCAAACATTCGGGAGAAACTGCTAGTAGAAAATTTGATGAGGTTTTGAGGTCTATGGTTGCCTTTTCTAGAGATATTATACAACCATCTGCTGGACATTTTAGAGAAGTTCCAAGCAAGATACGTAAAATTTACAAATATTGGCCATATTTTAGAGGGTGTATTGGGACTATTGACGGTACCGTGCTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_402939.p1 GENE.S_Transcript_402939~~S_Transcript_402939.p1 ORF type:5prime_partial len:104 (+),score=5.84 S_Transcript_402939:3-314(+)
HLLVTNYGLQSTRAMHAHEALAMFLWVCAHGHSNRNVQSRFKHSGETASRKFDEVLRSMVAFSRDIIQPSAGHFREVPSKIRKIYKYWPYFRGCIGTIDGTVL*

Click here to download the sequence:
Link to NCBI Protein BLAST