Transcript Information: S_Transcript_40298.p1


Annotated TAIR IDAT2G44710.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:18432902-18436629 | Forward length=809
E-Value9E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 139.41080263399
Replicate 240.66300852049
Replicate 344.195771983035
Condition 2: 8 Hour
Replicate 157.025037689074
Replicate 262.794223043096
Replicate 355.92729431971
Condition 3: 24 Hour
Replicate 151.953022708013
Replicate 242.728353012148
Replicate 343.237790408771


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40298.p1 GENE.S_Transcript_40298~~S_Transcript_40298.p1 ORF type:3prime_partial len:497 (+),score=171.93,RRM_1|PF00076.18|1.4e-18,RRM_1|PF00076.18|8.4e-08,RRM_1|PF00076.18|1.7e-14,RRM_6|PF14259.2|2.8e-11,RRM_6|PF14259.2|0.00068,RRM_6|PF14259.2|4e-09,RRM_5|PF13893.2|2.6e-06,RRM_5|PF13893.2|0.065,RRM_5|PF13893.2|0.00031,Nup35_RRM_2|PF14605.2|0.14,Nup35_RRM_2|PF14605.2|0.00042,RRM_7|PF16367.1|0.12,RRM_7|PF16367.1|1.1e+03,RRM_7|PF16367.1|0.033 S_Transcript_40298:61-1488(+)
ATGGATGTTGATCAGAACCCAGAGGATGTGAAAGATGATCAGAACCCAGAGAATGTAAAAGATGATCAGAACCCAGAGGATGTGAAAGATGATCAGAAACCAGAGGTTGTGAAAGATGATCAGAACCCAGAGGCTGTGAAAGATGATCAGAACCCTGAGAATATAAAAGATGATCAGAACCCAGAGGATGTGAAAGATGATCAGAAAGCAGAGAATCAGGATGATAAACCTGTGGGCAAGGTGGAAGAAGAAGGTGCTCAAGCAAAGGATGGGCCTCCTGCTGAGGCAATGGAGGACTATGGGGAAGAAGAGGGTTTTGTTGAACCTGGGGAGGAGGACCTCCAAGAGGATGATGAGCCTGAGTCTGTTGATGAGTATAAGGCATCGGATGAAGAGCACAAGGAATTAGCAGCTGCTGCCAAGGAGCGAAAGATTAAGAAGGAACTTGAAATATTTGTGGGTGGATTAGACCGTGAAGTTGTGGAAGATGATGTTAAGAAGGCTTTTGATAAGATTGGAGAGGTGCTTGAAGTGAGGTTGCTGAAAGATCCTTCAACAAACAAGAACAGGGGTTTTGCATTTGTAAGGTTTGCAACTAAAGAGCAGGCAAAGCGGGCCTTATCAGAAATGAAAAATCCTGTTATACGTGGGAAGCGATGTGGGGCTGCACCTAACGAGGACAACGACACTCTCTTCATTGGAAACATTTGTAATACATGGACAAAAGAAGCGATAAAACAGAAGCTCAAGGATTACAATGTTGAAGGTGTTGAGAACATTACTCTTGTTCAAGACCCTCGTCACGAGGGTTTAAGTCGTGGGTTTTGCTTCATTCAATTTGCTTGTCATGCTGATGCGATGTTTGCGTACAAGAGGCTTCAAAAGCCAGATGCAATATTTGGTCATACTGAGAGGACAGCAAAGGTTGCTTTTGCTGAGCCTCTACAAGAGCCAGATCCTGCGGTCATGGCCAAGGTTAAATCAGTTTTTGTAGATGGACTCCCTCCTCACTGGGATGAAGATCGTGTTAGGAAGCATTTCAAAAATTACGGGGAGATTGTACGTATTACTCTAGCTCGTAATATGTCTTCAGCAAAGCGAAAAGATTTTGGTTTTGTTGATTTCACTACACACGAGGCTGCAATTACTTGCATTGAGGACTTAAAGAATAAGGAGTTGGTCGATGGAAATGTGAAGACAAAAGTGAAAGCAAGGCTTTCCAATCCCCAGCCTAAAACTCAGGCTGTGAAGGGGGGAATGTGTGGCGGATTTCGAATCGGCCGGCCAAGCGGAAGGAGCTTTGGGCGTCCTGGTCCTTCAATGAACCGTCCGAATTTCCCATATGGAAGAGCTGTACGAGGCCAGTTTAATGACCCTGTTGGACCATATGGCCGAAGAGCTCCGTTTAGAGCTGCCCATGGGGCTTCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40298.p1 GENE.S_Transcript_40298~~S_Transcript_40298.p1 ORF type:3prime_partial len:497 (+),score=171.93,RRM_1|PF00076.18|1.4e-18,RRM_1|PF00076.18|8.4e-08,RRM_1|PF00076.18|1.7e-14,RRM_6|PF14259.2|2.8e-11,RRM_6|PF14259.2|0.00068,RRM_6|PF14259.2|4e-09,RRM_5|PF13893.2|2.6e-06,RRM_5|PF13893.2|0.065,RRM_5|PF13893.2|0.00031,Nup35_RRM_2|PF14605.2|0.14,Nup35_RRM_2|PF14605.2|0.00042,RRM_7|PF16367.1|0.12,RRM_7|PF16367.1|1.1e+03,RRM_7|PF16367.1|0.033 S_Transcript_40298:61-1488(+)
MDVDQNPEDVKDDQNPENVKDDQNPEDVKDDQKPEVVKDDQNPEAVKDDQNPENIKDDQNPEDVKDDQKAENQDDKPVGKVEEEGAQAKDGPPAEAMEDYGEEEGFVEPGEEDLQEDDEPESVDEYKASDEEHKELAAAAKERKIKKELEIFVGGLDREVVEDDVKKAFDKIGEVLEVRLLKDPSTNKNRGFAFVRFATKEQAKRALSEMKNPVIRGKRCGAAPNEDNDTLFIGNICNTWTKEAIKQKLKDYNVEGVENITLVQDPRHEGLSRGFCFIQFACHADAMFAYKRLQKPDAIFGHTERTAKVAFAEPLQEPDPAVMAKVKSVFVDGLPPHWDEDRVRKHFKNYGEIVRITLARNMSSAKRKDFGFVDFTTHEAAITCIEDLKNKELVDGNVKTKVKARLSNPQPKTQAVKGGMCGGFRIGRPSGRSFGRPGPSMNRPNFPYGRAVRGQFNDPVGPYGRRAPFRAAHGAS

Click here to download the sequence:
Link to NCBI Protein BLAST