Transcript Information: S_Transcript_403364.p1


Annotated TAIR IDAT1G66730.1
Annotated Gene NameDNA LIGASE 6
Annotated Gene Symbol(s)AtLIG6, LIG6
Annotation TypeHomolog
Chromosome Positionchr1:24884991-24891823 | Forward length=1396
E-Value1E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0404259742149
Replicate 21.9066608259581
Replicate 31.1763885156206
Condition 2: 8 Hour
Replicate 11.6674173498993
Replicate 21.7952718044225
Replicate 31.8421102868502
Condition 3: 24 Hour
Replicate 11.9327777573983
Replicate 21.4922674288953
Replicate 32.0758884284046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_403364.p1 GENE.S_Transcript_403364~~S_Transcript_403364.p1 ORF type:internal len:486 (-),score=81.38,DRMBL|PF07522.10|1.4e-19 S_Transcript_403364:2-1456(-)
CCCATTTCCAGTTTCCACCACAATGCTCTCACAACCACCACCATGTCCACCAAAACCCTAACCCTACAAACCTCCGATCTCTATCACCAATCTCAAAAGCCCCTCTCTCTATCTCCAATCCCCTCCGATTTTCCTCTCTCCAATCTCGTCCCCAAAACCCGCTTTATTATCGACGGTTTTCGAAATTCCGGCGAATTTTCAATTTCCTACTTTCTTTCTCACTTTCACTCCGATCACTACACCGGTCTCACTCCTAACTGGTCTAAAGGCATCGTCTTTTGCTCCGAAACCACTGGTCGCCTTGTTGTCGACATTCTTAGGGTTTCGCCGTTGCTTGTTTTCCGATTGCCGGTGAATCATACCGTCGTTATCGACGATTGTGAGGTAACCTTAATTGACGCTAATCATTGTCCTGGTGCTGTTCAGTTCTTGTTTAAAGTTCCTGTTGGTGATGGCAAATTTGAGCGCTTTGTTCATACTGGTGATTTTAGGTATTGTAGTGCTATGAAATTAGAACCTGTGTTGACTAAATTTGTTGGTTGTGATGCTGTTTTTCTTGACACTACTTATTGTCACCCTAAATTCGTGTTCCCATCACAAGAGGAGTCGATTGATTATGTGGTCAGTGTGGTGGATAGGATAGGTGCTGAGAATAGGAATGTAGATAAGAGTGTTTTGTTTCTTGTTGCTACTTATGTCGTTGGAAAAGAGAGGATTTTGCTGGAAATTGCGCGTCGGTGTGGGTGTAAGATATTTGTGGATGGTAGGAAAATGGAGGTTTTGCGGGCGTTAGGGTATGGAGATGAGGAGGGTGTGTTTACCGAAGAGGAATCCGGTAGTAATGTTCATGTTGTTGGGTGGAATGTGTTGGGGGAGACTTGGCCGTATTTTCGGCCTAATTTTTTGAAGATGAAGGATATTATGGTTGAAAAAGGATATTCTAAGGTTGTTGGGATTGTTCCTACTGGTTGGACTTATGAAGTAAAGAGAAACAAGTTTGCGGTTAGGACTGAGGATACACTTGAGATTCATCTTGTGCCTTACAGTGAGCATTCAAATTATGATGAACTCAGAGAGTATGTGAAGTTTTTGAAGCCGAAGCAGGTGATTCCTACCGTGGGTTCTCAAGGAGATAACATAGACAGCAATCATGCTGCAAAGATGCGAAAGCATTTTGCTGGGCTGGTTGACGAAATGGCCAATAAAAAGGAGTTTTTAATGGGTTTTCACCGTGTATCCCAGGGTAAGGGTCAGAGCAAGGTAGATGATCCTGTGATCAAGTTAGATGAGATTTTGGAATCGCCAAAAGAAGAGCCAGGTTTGAGCGATGTGAATTCTGATAAAGAAGCTGACTCGCATACCATGATAGATCCTTCTACTTCTTTGGACGAGACTGGTTCACTTCATTTGGCCTTATTGAGTGATAAGGAAAAGGAGGAGATTGTGCAAGAGCTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_403364.p1 GENE.S_Transcript_403364~~S_Transcript_403364.p1 ORF type:internal len:486 (-),score=81.38,DRMBL|PF07522.10|1.4e-19 S_Transcript_403364:2-1456(-)
PISSFHHNALTTTTMSTKTLTLQTSDLYHQSQKPLSLSPIPSDFPLSNLVPKTRFIIDGFRNSGEFSISYFLSHFHSDHYTGLTPNWSKGIVFCSETTGRLVVDILRVSPLLVFRLPVNHTVVIDDCEVTLIDANHCPGAVQFLFKVPVGDGKFERFVHTGDFRYCSAMKLEPVLTKFVGCDAVFLDTTYCHPKFVFPSQEESIDYVVSVVDRIGAENRNVDKSVLFLVATYVVGKERILLEIARRCGCKIFVDGRKMEVLRALGYGDEEGVFTEEESGSNVHVVGWNVLGETWPYFRPNFLKMKDIMVEKGYSKVVGIVPTGWTYEVKRNKFAVRTEDTLEIHLVPYSEHSNYDELREYVKFLKPKQVIPTVGSQGDNIDSNHAAKMRKHFAGLVDEMANKKEFLMGFHRVSQGKGQSKVDDPVIKLDEILESPKEEPGLSDVNSDKEADSHTMIDPSTSLDETGSLHLALLSDKEKEEIVQEL

Click here to download the sequence:
Link to NCBI Protein BLAST