Transcript Information: S_Transcript_40341.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value3.4E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.133156968583
Replicate 221.576435479093
Replicate 317.001319836586
Condition 2: 8 Hour
Replicate 133.248804943346
Replicate 233.176689365526
Replicate 330.585464699733
Condition 3: 24 Hour
Replicate 131.738558177717
Replicate 221.346676234235
Replicate 325.77804137597


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40341.p1 GENE.S_Transcript_40341~~S_Transcript_40341.p1 ORF type:5prime_partial len:499 (+),score=101.99,RRM_1|PF00076.18|2.3e-14,RRM_1|PF00076.18|1.4e-19,RRM_1|PF00076.18|3.2e-12,RRM_6|PF14259.2|1.5e-06,RRM_6|PF14259.2|1.1e-11,RRM_6|PF14259.2|2.4e-08,RRM_5|PF13893.2|8.2e-11,RRM_5|PF13893.2|0.00011,RRM_5|PF13893.2|2.1e-09 S_Transcript_40341:2-1498(+)
GGGGAACGACACTTGCTCTCAGCTCTCCGTTTTTTCTCTCCTATATCGTCCATTTTTTCTCTTTCTTCCTCGCTTTCGAGGGCTTTTTTTCTTTATTTTATTTTCTTTATTTATTTATTTAATAATTTTCTTTCCCCTGTTTTTTCACCATTCTCTTCTAAACTGTACTTTGGATTTCCTTCCCCCCTTGTTTTGTTTGTTTGGTTACTTAAAACCCTAAAAAATCCGATTTTGAAGATGCAACAACAGAGATTGAAGCAACATCAACATCATCAGCAACAACAACAAGCCCTGATGCAGCAATCTGTTTACCATCCTGGTTTACTGGCCGCTCCTCAGATAGAGCCTATCTTGAGTGGAAAGCTGCCACCTCGGTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATCCTCAGGTCACTGAACCACTTCTTCAGGAAGTTTTTTCAAACACTGGTCCAATAGAGGGATGCAAGCTGATCCGCAAGGAGAAGTCCTCCTATGGTTTTGTGGACTATTTTGACCGCAGATCGGCATCCCTTGCTATTGTGACCCTGAATGGGCGGCATCTGTTTGGACAACCCATCAAAGTTAATTGGGCATATGCCAGCAGTCAGAGGGAGGATACAACAAATCATTTTAACATATTTGTTGGAGATCTAAGCCCAGAGGTTACTGATGCTACACTGTTTGCATGCTTCTCTGCTTATCAGACCTGCTCAGATGCTAGAGTCATGTGGGATCAGAAGACTGGGCGTTCCAGGGGCTTTGGATTTGTTTCATTTAGGAACCAGCAGGATGCACAGAGTGCAATAAATGACCTAAATGGGAAGTGGCTAGGGAGCAGACAGATACGCTGCAACTGGGCTACCAAGGGTGCTGCAGGAAATGATGACAAGCCAAACTCAGATTCTAAGAGTGTTGCGGAACTCACAAATGGAGGATCTGAAGAAGGTCAAGAAAATACAAATGATGATGCTCCGGAGAATAACCCGCAATACACAACTGTTTATGTTGGCAATCTTGCCCCAGAGGTTACATCTGTAGAACTTCATCGTCATTTCCATTCCCTTGGTGCTGGTATTATTGAAGATGTTCGGATACAAAGGGATAAGGGCTTTGGTTTTGTAAGATACAGCACTCATGCTGAAGCTGCCAGGGCTATCCAACTAGGGAATGCAAGAAACCTTTATGGAAAACCTATAAAGTGTTCTTGGGGCAGTAAGCCCACCCCGCCTGGAACAAGCTCTGCACCACTTCCTCCACCAATGCAGGTGCCTACCTTCACTGCAGCTGATCTCGCTGCATATGAGAGACAACTGGCACTAAGCAAAATGGGTGGGGCCCAGGCTCTTATGCATCCACCAGGTCAGCTTCCGCTTAAACCAGCTGCCATGGCAATGGGTGCACCTGGAGCTGGTCAAGCAGTGTACAATGGCACGTTCCAGAATGTCGCCTCATCCCAACAGCTCATGTATTATCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40341.p1 GENE.S_Transcript_40341~~S_Transcript_40341.p1 ORF type:5prime_partial len:499 (+),score=101.99,RRM_1|PF00076.18|2.3e-14,RRM_1|PF00076.18|1.4e-19,RRM_1|PF00076.18|3.2e-12,RRM_6|PF14259.2|1.5e-06,RRM_6|PF14259.2|1.1e-11,RRM_6|PF14259.2|2.4e-08,RRM_5|PF13893.2|8.2e-11,RRM_5|PF13893.2|0.00011,RRM_5|PF13893.2|2.1e-09 S_Transcript_40341:2-1498(+)
GERHLLSALRFFSPISSIFSLSSSLSRAFFLYFIFFIYLFNNFLSPVFSPFSSKLYFGFPSPLVLFVWLLKTLKNPILKMQQQRLKQHQHHQQQQQALMQQSVYHPGLLAAPQIEPILSGKLPPRFDSSTCRSVYVGNIHPQVTEPLLQEVFSNTGPIEGCKLIRKEKSSYGFVDYFDRRSASLAIVTLNGRHLFGQPIKVNWAYASSQREDTTNHFNIFVGDLSPEVTDATLFACFSAYQTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGSRQIRCNWATKGAAGNDDKPNSDSKSVAELTNGGSEEGQENTNDDAPENNPQYTTVYVGNLAPEVTSVELHRHFHSLGAGIIEDVRIQRDKGFGFVRYSTHAEAARAIQLGNARNLYGKPIKCSWGSKPTPPGTSSAPLPPPMQVPTFTAADLAAYERQLALSKMGGAQALMHPPGQLPLKPAAMAMGAPGAGQAVYNGTFQNVASSQQLMYYH*

Click here to download the sequence:
Link to NCBI Protein BLAST