Transcript Information: S_Transcript_40343.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value3.4E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.479844266598
Replicate 21.9454163136887
Replicate 34.2503299591464
Condition 2: 8 Hour
Replicate 12.5214389352923
Replicate 22.9590020244929
Replicate 30.93977684831581
Condition 3: 24 Hour
Replicate 11.5322062568553
Replicate 26.267747490052
Replicate 31.8701716292371


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40343.p1 GENE.S_Transcript_40343~~S_Transcript_40343.p1 ORF type:5prime_partial len:499 (+),score=94.18,RRM_1|PF00076.18|2.3e-14,RRM_1|PF00076.18|1.4e-19,RRM_1|PF00076.18|3.2e-12,RRM_6|PF14259.2|1.5e-06,RRM_6|PF14259.2|1.1e-11,RRM_6|PF14259.2|2.4e-08,RRM_5|PF13893.2|8.2e-11,RRM_5|PF13893.2|0.00011,RRM_5|PF13893.2|2.1e-09 S_Transcript_40343:3-1499(+)
GGGAACGACACTTGCTCTCAGCTCTCCGTTTTTTCTCTCCTATATCGTCCATTTTTTCTCTTTCTTCCTCGCTTTCGAGGGCTTTTTTTCTTTATTTTATTTTCTTTATTTATTTATTTAATAATTTTCTTTCCCCTGTTTTTTCACCATTCTCTTCTAAACTGGTCTTTGGATTTCCTCCCCCCCCCTTTTTTGTTTGTTTGGTTACGTAAAACCCTAAAAAATCCGATTTTGAAGATGCAACAACAGAGATTGAAGCAACATCAACATCATCAGCAACAACAACAAGCCCTGATGCAGCAATCTGTTTACCATCCTGGTTTACTGGCCGCTCCTCAGATAGAGCCTATCTTGAGTGGAAAGCTGCCACCTCGGTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATCCTCAGGTCACTGAACCACTTCTTCAGGAAGTTTTTTCAAACACTGGTCCAATAGAGGGATGCAAGCTGATCCGCAAGGAGAAGTCCTCCTATGGTTTTGTGGACTATTTTGACCGCAGATCGGCATCCCTTGCTATTGTGACCCTGAATGGGCGGCATCTGTTTGGACAACCCATCAAAGTTAATTGGGCATATGCCAGCAGTCAGAGGGAGGATACAACAAATCATTTTAACATATTTGTTGGAGATCTAAGCCCAGAGGTTACTGATGCTACACTGTTTGCATGCTTCTCTGCTTATCAGACCTGCTCAGATGCTAGAGTCATGTGGGATCAGAAGACTGGGCGTTCCAGGGGCTTTGGATTTGTTTCATTTAGGAACCAGCAGGATGCACAGAGTGCAATAAATGACCTAAATGGGAAGTGGCTAGGGAGCAGACAGATACGCTGCAACTGGGCTACCAAGGGTGCTGCAGGAAATGATGACAAGCCAAACTCAGATTCTAAGAGTGTTGCGGAACTCACAAATGGAGGATCTGAAGAAGGTCAAGAAAATACAAATGATGATGCTCCGGAGAATAACCCGCAATACACAACTGTTTATGTTGGCAATCTTGCCCCAGAGGTTACATCTGTAGAACTTCATCGTCATTTCCATTCCCTTGGTGCTGGTATTATTGAAGATGTTCGGATACAAAGGGATAAGGGCTTTGGTTTTGTAAGATACAGCACTCATGCTGAAGCTGCCAGGGCTATCCAACTAGGGAATGCAAGAAACCTTTATGGAAAACCTATAAAGTGTTCTTGGGGCAGTAAGCCCACCCCGCCTGGAACAAGCTCTGCACCACTTCCTCCACCAATGCAGGTGCCTACCTTCACTGCAGCTGATCTCGCTGCATATGAGAGACAACTGGCACTAAGCAAAATGGGTGGGGCCCAGGCTCTTATGCATCCACCAGGTCAGCTTCCGCTTAAACCAGCTGCCATGGCAATGGGTGCACCTGGAGCTGGTCAAGCAGTGTACAATGGCACGTTCCAGAATGTCGCCTCATCCCAACAGCTCATGTATTATCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40343.p1 GENE.S_Transcript_40343~~S_Transcript_40343.p1 ORF type:5prime_partial len:499 (+),score=94.18,RRM_1|PF00076.18|2.3e-14,RRM_1|PF00076.18|1.4e-19,RRM_1|PF00076.18|3.2e-12,RRM_6|PF14259.2|1.5e-06,RRM_6|PF14259.2|1.1e-11,RRM_6|PF14259.2|2.4e-08,RRM_5|PF13893.2|8.2e-11,RRM_5|PF13893.2|0.00011,RRM_5|PF13893.2|2.1e-09 S_Transcript_40343:3-1499(+)
GNDTCSQLSVFSLLYRPFFLFLPRFRGLFFFILFSLFIYLIIFFPLFFHHSLLNWSLDFLPPPFLFVWLRKTLKNPILKMQQQRLKQHQHHQQQQQALMQQSVYHPGLLAAPQIEPILSGKLPPRFDSSTCRSVYVGNIHPQVTEPLLQEVFSNTGPIEGCKLIRKEKSSYGFVDYFDRRSASLAIVTLNGRHLFGQPIKVNWAYASSQREDTTNHFNIFVGDLSPEVTDATLFACFSAYQTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGSRQIRCNWATKGAAGNDDKPNSDSKSVAELTNGGSEEGQENTNDDAPENNPQYTTVYVGNLAPEVTSVELHRHFHSLGAGIIEDVRIQRDKGFGFVRYSTHAEAARAIQLGNARNLYGKPIKCSWGSKPTPPGTSSAPLPPPMQVPTFTAADLAAYERQLALSKMGGAQALMHPPGQLPLKPAAMAMGAPGAGQAVYNGTFQNVASSQQLMYYH*

Click here to download the sequence:
Link to NCBI Protein BLAST