Transcript Information: S_Transcript_40344.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value2.6E-228
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.6180594631236
Replicate 211.27853396932
Replicate 310.517242573133
Condition 2: 8 Hour
Replicate 117.503324435447
Replicate 214.124792420194
Replicate 317.452078894506
Condition 3: 24 Hour
Replicate 113.213707528934
Replicate 212.647422346068
Replicate 311.5579633221


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40344.p1 GENE.S_Transcript_40344~~S_Transcript_40344.p1 ORF type:5prime_partial len:491 (+),score=101.29,RRM_1|PF00076.18|2.3e-14,RRM_1|PF00076.18|1.4e-19,RRM_1|PF00076.18|2.6e-12,RRM_6|PF14259.2|1.4e-06,RRM_6|PF14259.2|1.1e-11,RRM_6|PF14259.2|5.4e-09,RRM_5|PF13893.2|8e-11,RRM_5|PF13893.2|0.00011,RRM_5|PF13893.2|2.1e-09 S_Transcript_40344:1-1473(+)
TATCGTCCATTTTTTCTCTTTCTCCCTCGCTTTCGAGGGCTTTTTTTTTTCTTTCTTTCTTTCTTTCTTTATTTTCTTTTCTTTTCTTTTTATTTATTTAATAATTTTCTTTCCCCTGTTTTTTCACCATTCTCTTCTAAACTGTTCTTTGGATTTCTTCCCCCCTTTGTGTTTGTTTGGTTACTTAAAACCCTAAAAAATCCGATTTTGAAGATGCAACAACAGAGATTGAAGCAACATCAACATCATCAGCAACAACAACAAGCCCTGATGCAGCAATCTGTTTACCATCCTGGTTTACTGGCCGCTCCTCAGATAGAGCCTATCTTGAGTGGAAAGCTGCCACCTCGGTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATCCTCAGGTCACTGAACCACTTCTTCAGGAAGTTTTTTCAAACACTGGTCCAATAGAGGGATGCAAGCTGATCCGCAAGGAGAAGTCCTCCTATGGTTTTGTGGACTATTTTGACCGCAGATCGGCATCCCTTGCTATTGTGACCCTGAATGGGCGGCATCTGTTTGGACAACCCATCAAAGTTAATTGGGCATATGCCAGCAGTCAGAGGGAGGATACAACAAATCATTTTAACATATTTGTTGGAGATCTAAGCCCAGAGGTTACTGATGCTACACTGTTTGCATGCTTCTCTGCTTATCAGACCTGCTCAGATGCTAGAGTCATGTGGGATCAGAAGACTGGGCGTTCCAGGGGCTTTGGATTTGTTTCATTTAGGAACCAGCAGGATGCACAGAGTGCAATAAATGACCTAAATGGGAAGTGGCTAGGAAGCAGACAGATACGCTGTAACTGGGCTGCCAAGGGTGCTGCAGGAAATGATGACAAGCCAAACTCAGATTCTAAGAGTGTTGCGGAACTCACAAATGGAGGATCTGAAGAAGGTCAAGAAAATACAAATGATGATGCTCCGGAGAATAACCCGCAATACACAACTGTTTATGTTGGCAATCTTGCCCCAGAGGTTACGTCTGTAGATCTTCATCGTCATTTCCATTCTCTTGGTGCTGGTATTATTGAAGATGTTCGGATACAAAGGGATAAGGGCTTTGGTTTTGTAAGATACAGCACTCATGCTGAAGCTGCCAGGGCTATCCAACTAGGGAATGCAAGAAACCTTTATGGAAAACCTATAAAGTGTTCTTGGGGCAGTAAGCCCACCCCGCCTGGAACAAGCTCTGCACCACTTCCTCCACCAATGCAGGTGCCTACCTTCACTGCAGCTGATCTCGCTGCATATGAGAGACAACTGGCACTAAGCAAAATGGGTGGGGCCCAGGCTCTTATGCATCCACCAGGTCAGCTTCCGCTTAAACCAGCTGCCATGGCAATGGGTGCACCTGGAGCTGGTCAAGCAGTGTACAATGGCACGTTCCAGAATGTCGCCTCATCCCAACAGCTCATGTATTATCATTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40344.p1 GENE.S_Transcript_40344~~S_Transcript_40344.p1 ORF type:5prime_partial len:491 (+),score=101.29,RRM_1|PF00076.18|2.3e-14,RRM_1|PF00076.18|1.4e-19,RRM_1|PF00076.18|2.6e-12,RRM_6|PF14259.2|1.4e-06,RRM_6|PF14259.2|1.1e-11,RRM_6|PF14259.2|5.4e-09,RRM_5|PF13893.2|8e-11,RRM_5|PF13893.2|0.00011,RRM_5|PF13893.2|2.1e-09 S_Transcript_40344:1-1473(+)
YRPFFLFLPRFRGLFFFFLSFFLYFLFFSFYLFNNFLSPVFSPFSSKLFFGFLPPFVFVWLLKTLKNPILKMQQQRLKQHQHHQQQQQALMQQSVYHPGLLAAPQIEPILSGKLPPRFDSSTCRSVYVGNIHPQVTEPLLQEVFSNTGPIEGCKLIRKEKSSYGFVDYFDRRSASLAIVTLNGRHLFGQPIKVNWAYASSQREDTTNHFNIFVGDLSPEVTDATLFACFSAYQTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGSRQIRCNWAAKGAAGNDDKPNSDSKSVAELTNGGSEEGQENTNDDAPENNPQYTTVYVGNLAPEVTSVDLHRHFHSLGAGIIEDVRIQRDKGFGFVRYSTHAEAARAIQLGNARNLYGKPIKCSWGSKPTPPGTSSAPLPPPMQVPTFTAADLAAYERQLALSKMGGAQALMHPPGQLPLKPAAMAMGAPGAGQAVYNGTFQNVASSQQLMYYH*

Click here to download the sequence:
Link to NCBI Protein BLAST