Transcript Information: S_Transcript_40349.p1


Annotated TAIR IDAT1G17370.1
Annotated Gene Nameoligouridylate binding protein 1B
Annotated Gene Symbol(s)UBP1B
Annotation TypeOrtholog
Chromosome Positionchr1:5951842-5954825 | Reverse length=419
E-Value3.4E-159
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5186767009206
Replicate 21.3789243473447
Replicate 31.5034839198587
Condition 2: 8 Hour
Replicate 11.3328368948208
Replicate 22.3101365443196
Replicate 32.3169399570632
Condition 3: 24 Hour
Replicate 12.0182772790223
Replicate 20.80062377851227
Replicate 30.82245796973205


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40349.p1 GENE.S_Transcript_40349~~S_Transcript_40349.p1 ORF type:5prime_partial len:368 (+),score=64.67,RRM_1|PF00076.18|1.5e-14,RRM_1|PF00076.18|8.6e-20,RRM_1|PF00076.18|1.2e+03,RRM_6|PF14259.2|9.3e-07,RRM_6|PF14259.2|7.2e-12,RRM_5|PF13893.2|5.3e-11,RRM_5|PF13893.2|7.3e-05 S_Transcript_40349:1-1104(+)
TATCGTCCATTTTTTCTCTTTCTCCCTCGCTTTCGAGGGCTTTTTTTTTTCTTTCTTTCTTTCTTTCTTTATTTTCTTTTCTTTTCTTTTTATTTATTTAATAATTTTCTTTCCCCTGTTTTTTCACCATTCTCTTCTAAACTGTTCTTTGGATTTCTTCCCCCCTTTGTGTTTGTTTGGTTACTTAAAACCCTAAAAAATCCGATTTTGAAGATGCAACAACAGAGATTGAAGCAACATCAACATCATCAGCAACAACAACAAGCCCTGATGCAGCAATCTGTTTACCATCCTGGTTTACTGGCCGCTCCTCAGATAGAGCCTATCTTGAGTGGAAAGCTGCCACCTCGGTTTGATTCAAGTACATGCCGCAGTGTGTATGTTGGAAACATTCATCCTCAGGTCACTGAACCACTTCTTCAGGAAGTTTTTTCAAACACTGGTCCAATAGAGGGATGCAAGCTGATCCGCAAGGAGAAGTCCTCCTATGGTTTTGTGGACTATTTTGACCGCAGATCGGCATCCCTTGCTATTGTGACCCTGAATGGGCGGCATCTGTTTGGACAACCCATCAAAGTTAATTGGGCATATGCCAGCAGTCAGAGGGAGGATACAACAAATCATTTTAACATATTTGTTGGAGATCTAAGCCCAGAGGTTACTGATGCTACACTGTTTGCATGCTTCTCTGCTTATCAGACCTGCTCAGATGCTAGAGTCATGTGGGATCAGAAGACTGGGCGTTCCAGGGGCTTTGGATTTGTTTCATTTAGGAACCAGCAGGATGCACAGAGTGCAATAAATGACCTAAATGGGAAGTGGCTAGGGAGCAGACAGATACGCTGCAACTGGGCTACCAAGGGTGCTGCAGGAAATGATGACAAGCCAAACTCAGATTCTAAGAGTGTTGCGGAACTCACAAATGGAGGATCTGAAGAAGGTCAAGAAAATACAAATGATGATGCTCCGGAGAATAACCCGCAATACACAACTGTTTATGTTGGCAATCTTGCCCCAGAGAACTTCATCGTCATTTTCATTCCCTTGGTGCTGGTATTATTGAAGATGTTCGGATACAAAGGGATAAGGGCTTTGGTTTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40349.p1 GENE.S_Transcript_40349~~S_Transcript_40349.p1 ORF type:5prime_partial len:368 (+),score=64.67,RRM_1|PF00076.18|1.5e-14,RRM_1|PF00076.18|8.6e-20,RRM_1|PF00076.18|1.2e+03,RRM_6|PF14259.2|9.3e-07,RRM_6|PF14259.2|7.2e-12,RRM_5|PF13893.2|5.3e-11,RRM_5|PF13893.2|7.3e-05 S_Transcript_40349:1-1104(+)
YRPFFLFLPRFRGLFFFFLSFFLYFLFFSFYLFNNFLSPVFSPFSSKLFFGFLPPFVFVWLLKTLKNPILKMQQQRLKQHQHHQQQQQALMQQSVYHPGLLAAPQIEPILSGKLPPRFDSSTCRSVYVGNIHPQVTEPLLQEVFSNTGPIEGCKLIRKEKSSYGFVDYFDRRSASLAIVTLNGRHLFGQPIKVNWAYASSQREDTTNHFNIFVGDLSPEVTDATLFACFSAYQTCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLNGKWLGSRQIRCNWATKGAAGNDDKPNSDSKSVAELTNGGSEEGQENTNDDAPENNPQYTTVYVGNLAPENFIVIFIPLVLVLLKMFGYKGIRALVL*

Click here to download the sequence:
Link to NCBI Protein BLAST