Transcript Information: S_Transcript_40358.p1


Annotated TAIR IDAT4G25230.1
Annotated Gene NameRPM1 interacting protein 2
Annotated Gene Symbol(s)RIN2
Annotation TypeOrtholog
Chromosome Positionchr4:12924446-12928671 | Forward length=578
E-Value4.4E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.030998804589
Replicate 256.17700012333
Replicate 355.549268443585
Condition 2: 8 Hour
Replicate 187.01781699611
Replicate 287.418764718932
Replicate 386.212383635216
Condition 3: 24 Hour
Replicate 161.868899475073
Replicate 258.561115871076
Replicate 362.450472961983


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40358.p1 GENE.S_Transcript_40358~~S_Transcript_40358.p1 ORF type:complete len:584 (+),score=81.30,zf-RING_2|PF13639.2|9.7e-11,CUE|PF02845.12|3e+02,CUE|PF02845.12|2.2e-08,zf-C3HC4|PF00097.21|3.2e-08,zf-rbx1|PF12678.3|1.9e-06,zf-RING_UBOX|PF13445.2|2.2e-06,zf-RING_11|PF17123.1|6e-06,zf-C3HC4_2|PF13923.2|8.1e-06 S_Transcript_40358:753-2504(+)
ATGGGTGTGAGGTATCTAGCAATCTCAGCAGTATGTACCGTGGTCAGCTTCATAGGGCTACAGTGTTGGACCGAGATATCACTTGAGAAATTCAAGGTGGATGGGCTAATTCATCGGGATACGCTTTACACAGAGAATCTTACTCATATTGTCGAACTGCTTCTTCGTTCTCATGCGATGATTACATTGCTGGCAGTGTCTGTCATCAATGCGTTCGTGCTGCTAATTTTGTGCCTCAAGACTATTTTTTTTGGAGAGCTATTTTCTACTGAAACCCGGAAAATGGCGGAACGGCTTGTCAATTATGTCATCTATAAGGGAACGTTTCTTCCACTAATAATTCCGCCAACAGTATTTCAAGCCAGCCTGTGGCTGACATGGTTGACTGTTCTTTGTTTTCTGAAGATGTTTCAAGCATTGGCAAGAGACCGACTTGAACGTTTGAATGCATCTCCTTCTGCCACCCCATGGACTTACTTTCGTGTATATTCAGCGCTACTGCTAGTTTTGGTTGTTGACTTCCTATGGATATGGTTTTGTGCCGCTGTATCTGGACCTTTAGTTTCATCTACCTATTGGCTGTTATTCTTTGAGCCACTCAGCATAGCTTTTGAAACACTGCAGGCTATTGTGGTACATGGATTTCAGTTAATGGATATATGGCTTCACCATTCTGCGGCAGAAAGTTCTGATTGCCAAAGATCGAAATTCTTGGAGACATCAGCTGCAGGTTCTTTATGGGAATGGAAGAGAACTGTTGTTCGAAATATGGGCTTTTTCCTTGACATGATGACTCTGGTAATGGCACTTGGTCATTATGTTCTGATCTGGTGGCTTCATGGCATGGCATTTCATCTGGTCGATGCAATCCTCTTCTTAAATATACGGGCTCTGATAAGTGCAATAGTGAAGCGTATCAAAGGATTTATAAAATTGAGGATAGCTTTAGGTGCCCTTCACGAGGCACTTCCTGATGCCACATCAGAGGAAATACGAGTATACGATGATGAATGTGCCATCTGCAGGGAGCCAATGGCAAAGGCTAAAAAGCTACCTTGCAATCACCTCTTTCATCTTGCTTGCTTGCGATCATGGTTGGACCAAGGTCTTAGTGATATTTATACATGCCCTACCTGTAGGAAACCCCTTTTTGTCGGCAGAGTTGAAGTTGAGGCGAACTCTCATAATACAGCAGTATCAAGTGATGAACAACTTGCTCGTCAATTAAGTTCAGGACTTGATCCGCCAAATGCTGGTGGACAAGGCGGAGTTTTCCCTAATCAAAACCAAAATTCTTTGGACGCTAGTGCTTGGAGAGGATCAGGAGCAGACGCAAATTGGTTGCAGCCTTGGGCAAGTCAGGGTCTTGATGGAGCTGGTCCATCAACTGCCATAAGATCTGTTGGATTGGGAAGAGTCCAAATGATGATGAGGCATCTTGCTTCTGTAGGAGAAACCTATGCCCAGACTGCACTTGAAGATACTTCTTGGAGCCTTTGGCCGACAAATTCCTCTCAGGCTACTACATCTGGTACTGCATTTCCACCACCTCCACTAAGATACCCTACACCTATGGGTGCCATGCATAGGAGGGCCGCCTCCCATCCAGCGAATGATAGCATTGCAAACTTACTTGCCATGGCAGAGACTGTGAGGGAGGTGCTCCCACACATCCCTGATGAATTAATTTTTCAGGACCTTCAGCAAACAAATTCTGTCGCTGTGACGGTTAACAACCTTCTTCAGATGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40358.p1 GENE.S_Transcript_40358~~S_Transcript_40358.p1 ORF type:complete len:584 (+),score=81.30,zf-RING_2|PF13639.2|9.7e-11,CUE|PF02845.12|3e+02,CUE|PF02845.12|2.2e-08,zf-C3HC4|PF00097.21|3.2e-08,zf-rbx1|PF12678.3|1.9e-06,zf-RING_UBOX|PF13445.2|2.2e-06,zf-RING_11|PF17123.1|6e-06,zf-C3HC4_2|PF13923.2|8.1e-06 S_Transcript_40358:753-2504(+)
MGVRYLAISAVCTVVSFIGLQCWTEISLEKFKVDGLIHRDTLYTENLTHIVELLLRSHAMITLLAVSVINAFVLLILCLKTIFFGELFSTETRKMAERLVNYVIYKGTFLPLIIPPTVFQASLWLTWLTVLCFLKMFQALARDRLERLNASPSATPWTYFRVYSALLLVLVVDFLWIWFCAAVSGPLVSSTYWLLFFEPLSIAFETLQAIVVHGFQLMDIWLHHSAAESSDCQRSKFLETSAAGSLWEWKRTVVRNMGFFLDMMTLVMALGHYVLIWWLHGMAFHLVDAILFLNIRALISAIVKRIKGFIKLRIALGALHEALPDATSEEIRVYDDECAICREPMAKAKKLPCNHLFHLACLRSWLDQGLSDIYTCPTCRKPLFVGRVEVEANSHNTAVSSDEQLARQLSSGLDPPNAGGQGGVFPNQNQNSLDASAWRGSGADANWLQPWASQGLDGAGPSTAIRSVGLGRVQMMMRHLASVGETYAQTALEDTSWSLWPTNSSQATTSGTAFPPPPLRYPTPMGAMHRRAASHPANDSIANLLAMAETVREVLPHIPDELIFQDLQQTNSVAVTVNNLLQM*

Click here to download the sequence:
Link to NCBI Protein BLAST