Transcript Information: S_Transcript_40393.p1


Annotated TAIR IDAT3G45830.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02290.1); Has 499 Blast hits to 438 proteins in 100 species: Archae - 0; Bacteria - 7; Metazoa - 236; Fungi - 15; Plants - 108; Viruses - 2; Other Eukaryotes - 131 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:16841277-16845173 | Forward length=1298
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.9306349121887
Replicate 28.0302666217493
Replicate 38.7497042946659
Condition 2: 8 Hour
Replicate 110.133117267074
Replicate 29.9504145172987
Replicate 39.7019499106438
Condition 3: 24 Hour
Replicate 110.525703683385
Replicate 28.6354330246424
Replicate 38.5070646436826


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40393.p1 GENE.S_Transcript_40393~~S_Transcript_40393.p1 ORF type:complete len:1349 (+),score=379.67 S_Transcript_40393:1050-5096(+)
ATGGCTATTGAAAAGAACTACGTCAATGCAACAGCAGCGGGGGTGGGTTCACGGTTTGATTCTGAGTTTTCTGTGGGGAGTCGGAGTAGGGAGACTATGTCCAGCGACGATGATGAGCTTCGAAGGAGGAATTCTGGTGCTGATTCTGAGGATGATGATGAATTTGATGATGCTGATTCTGGGGCTGGCTCTGATGATTTTGATTTGTTGGAATTAGGGGAAACTCGGTCCGAGTTCTGCCAGGTTGGGGATCAGACTTGTAGTATCCCTTTTGAGCTTTATGATCTCCCTGATTTGCAGGGTATTTTGTCGTTGGATGTCTGGAATGAGTGCTTGACTGAGGAAGAAAGGTTTGGCCTTGCTAAGTACCTACCTGACATGGATCAGGAGACCTTCATGCGCACCTTGAAGGAGCTCTTTGAAGGCAACAATTTTCATTTTGGAAGTCCTATCACTGCGCTATTCCAGATGTTGAAAGGAGGCTTGTGTGAGCCCAGAGTCTCCCTTTACCGCCAGGGTGTGGGTTTCTTCCAGAAACACCAGCACCATCACTTGATGCGCAAGTATCAGGATTCCATGGTCTCTAGTCTTGTACAGATGAAAGATGCTTGGCAGAACTGTAAGGGGTATAGCATTGAAGAGAAACTCCGTGTTCTGAATATTGTCAGAAGTCAAAAGAGTTTGATGGGTGAAAGGAATGATAACTTGGGGTCTAATTCTTCTGAGGGGGAAGAATCAGCTGAGGCTTTATGGTCTAAGAGGCCAAGGGGAAGGAGTGCTTGGCAGAAGGCAGGCCATGATCGAATATATGGTGTGAATCCTGCTATAGATGTTCTTTCTCACGGCAGGGAAGGAGCTGTTGATCCCCCCAAGTATGGCAAGAAGAATCCAAAAGGTTTGCTGAAGGTGGTTGGTTCAAGATCCCCTTCGCTGAATGAGCCACCACCACATGTTCATTCTCGTTACCCGAGCCTGAAGACTGATGATTTTGGGCCAGACATGGCTCCCTCTAGAGGGGGTAAGGCAACTATTCATGATGTCATGGCTGGACGACAGATGAGGGAACAGATGGCTAGTGGTGATGATGAGCGACAAATGATGAATGGGATGTCATCTCAGAGAGATTGGAATGTTGCGCAGTGTAATCTGAATGATCGAGGGAGGCCTGCCAGGTCAGGGAAGAAGCATGATGTCTTCAGAGTTGATGAATATGATGGTAATGGCTATTCGGGTTTTCCTTTTTCTGCAAAGAATGATTTCTCTGGCCAGGGAAGGAACCTAAATATCAATCAGCTATCAGACATTAAAGTCTTGACTGCCAAGCCTGGCAGCTTGAGGGCTATGTATGACTCTGCTAAGAAGGCCAAGTATGTGGAGCCTACTTATGAGGATAAAATGAGGCTTGCAAAAGGTCGAGCTAAACAGATGGCAACGAAAGGAAATATGGATGACTTCACTGCTTTTGAAGAACCACATTGGAATATGAACATCCAGGGAGACAAATACTTTGTTGACCCGTCATTTGATTATGATGATGCTGATATCAGTGGCAAAAATTTGAGGATTTCTGATTCTAGACTCAAAACTCTTCAAACTGCTCAACATCAGATGGATGATAGAATATATCATCCGAAGAAGCGGACAAAGCTAATGCAGGAGAGCAGTAAAGGGGTTTCAGTGCCGAATGGACGGTCAAGCATGATTCCAATTAAAAGTGGCAGAATGTTCCATGGAGGTGAGGAAACTGAGTCAGACTCCTCAGATCAACGTGAGGAAGAAGATGACAACAGCCCTTTGATTATGACCAAGCTAGCCATACATGGTCGTTTGGAGAATTCTCGATCTTCTCTTCCCAGATCAGGTTTTGATCGGAAGAAGGACAGAAGAGCTATGAGAGATTTGAACGGGTCTTCCCTGGCTCTTGATGGTAGGCTACCTGTCTCCAGTACAATGGGTGATTTTGACAGACACATGCAGATGCCTGAGGAAACTTATTCTTCTAAAAAGAGGCAGAAGGCTAAGATGCGGCATCCAGATATCTTACAGAACTTCATGTCAAGAGTTGCAGAGGAGGGCTACTATTCTGGTTTGGGAAATTTGAATTCTGAGAGTGATAGAAAATCAGCACACAGACATGGGAGGAATGGGCAACTGCAAGCAGAACTTTCCGGAGGCTTTCCTGTTTCCATGAATAAGGCCTCCCTGATGGATAGAAGACAAAAAGGGAATGCCGTCCATGAGTTTGCACAACATCAGTCCAAATATATGCAAGGTTATCCTGTGCAGGAGGATGGGGGTTTATATGAAGTTGATCCTGTGGGGCCAAGTGCACATAATATGGATATGACATTAGCGGGCTTCACGTCATCTATTAAGAAGCAGAGGGGAAATGAAGGTTTAATAGACATGGATGGGCAAGAGAGATCTGATTACATGCAATCTCATCAACAGCTCTTTGAATCTGCTCCACTGGGGAAGAAGGTCAAGAAGAGACCAGAGGCAGACATTGGTTCCCCTGATGCTGGTTCCTTCGATGTTCCTGTTGCAGAGGTTGGAGTGGCTGATTTGGAGCTGGATTTGAAACCCCAGAAAAAAACGTTCACTTTGATTACTCCAACTATACATACAGACTTCTCTTTCTCCATCATTCACCTTCTTTCTGCTGTACGCTTGGCATTGATAACTCCCAATACTGAAGATTCCTTAGAGGTCGGGAAGCCTAATGAGAACACTGGTGTCAGAACAGAGGAAGGAAGTGTACATGAGCACACCAATGGTTCACTACCAAATCTGGATGTGAACAATCCTGTTCATCCTGAGCAAACAAATATCCCCCCTTTTACTGTTCAGGATATTGTTAATCGTGTGAGATCCAACCCTGGAGATCCCTGCATTCTAGAAACACAGGAACCACTTCAGGATTTAGTCAGAGGAGTTCTGAAGATATTTTCATCAAAAACAGCACCCTTAGGGGCTAAGGGCTGGAAGCCTCTTATATGCTATGAAAAATCTACGAAGTCCTGGTCTTGGACTGGACCACTGCCCCAGAGTTCAACAGAATATGAAACGTTTGAGGAGGTAACATCCCCTGATGCTTGGGGAATCCCTCATAAAATGCTTGTAAAGTTAGTGGATTCATTTGCCAATTGGCTAAAAAGCGGACAGGAGACCTTGCGGCAAATAGGAAGTCTTCCCCCACCCCCTTTGGAGCTGATGCAGGTCAATGTTGATGAAAAAGAAAGGTTTAGGGACTTGAGAGCTCAAAAGAGTCTAAGCACCATTTCTCAAAGCCCCGAGGAAGTCAGGGCCTACTTCCGCAAGGAGGAGCAACTGAGGTATTCAGTTCCTGACCGAGCCTTCTCTTATACTGCCGCTGACGGTAAGAAATCTATTGTTGCTCCATTGAGAAGATGTGGGGGTAAGCCAACATCAAAAGCCCGAGATCATTTTCTGTTGAAACGTGATCGACCACCCCATGTTACAATCCTTTGTCTCGTCAGAGATGCAGCTGCCAGGTTACCGGGGAGCATTGGTACCAGAGCTGATGTTTGCACTTTGATAAGGGATTCTCAGTATGTTGTGGAGGATGTCACTGATACTCAGGTTAATTCTGTTGTTAGTGGAGCCCTGGATCGTTTGCATTATGAGCGTGACCCTTGTGTCCAGTTTGATGGAGAGAGGAAATTGTGGGTTTACCTGCATAGGGATAGGGAAGAAGAGGATTTTGAAGATGATGGTACCTCCTCTACAAAGAAATGGAAGAGGCAAAAGAAAGATGCGTCTGAGCAGGATGACCAAGTTACTGTTGCTTGTCATGGAACCGGAGAGGCAAGCGGTTTTGATATGGGCTCTGATCTTAATGTTGAGCCATCATGTGCAAACAATGACAAAATGTTGGACGTTGTGTGTGATGATACGAGACAAAGAACAGAAGATGGCGTAAAGGCCAGTGACATGCCTGATGAAGGCACTTTCCAGCAAATGCTAGGAAGTAAACTGCAGTGTCAAGAGAATTCTGCCAATGAAGACTTTGGTGATGACACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40393.p1 GENE.S_Transcript_40393~~S_Transcript_40393.p1 ORF type:complete len:1349 (+),score=379.67 S_Transcript_40393:1050-5096(+)
MAIEKNYVNATAAGVGSRFDSEFSVGSRSRETMSSDDDELRRRNSGADSEDDDEFDDADSGAGSDDFDLLELGETRSEFCQVGDQTCSIPFELYDLPDLQGILSLDVWNECLTEEERFGLAKYLPDMDQETFMRTLKELFEGNNFHFGSPITALFQMLKGGLCEPRVSLYRQGVGFFQKHQHHHLMRKYQDSMVSSLVQMKDAWQNCKGYSIEEKLRVLNIVRSQKSLMGERNDNLGSNSSEGEESAEALWSKRPRGRSAWQKAGHDRIYGVNPAIDVLSHGREGAVDPPKYGKKNPKGLLKVVGSRSPSLNEPPPHVHSRYPSLKTDDFGPDMAPSRGGKATIHDVMAGRQMREQMASGDDERQMMNGMSSQRDWNVAQCNLNDRGRPARSGKKHDVFRVDEYDGNGYSGFPFSAKNDFSGQGRNLNINQLSDIKVLTAKPGSLRAMYDSAKKAKYVEPTYEDKMRLAKGRAKQMATKGNMDDFTAFEEPHWNMNIQGDKYFVDPSFDYDDADISGKNLRISDSRLKTLQTAQHQMDDRIYHPKKRTKLMQESSKGVSVPNGRSSMIPIKSGRMFHGGEETESDSSDQREEEDDNSPLIMTKLAIHGRLENSRSSLPRSGFDRKKDRRAMRDLNGSSLALDGRLPVSSTMGDFDRHMQMPEETYSSKKRQKAKMRHPDILQNFMSRVAEEGYYSGLGNLNSESDRKSAHRHGRNGQLQAELSGGFPVSMNKASLMDRRQKGNAVHEFAQHQSKYMQGYPVQEDGGLYEVDPVGPSAHNMDMTLAGFTSSIKKQRGNEGLIDMDGQERSDYMQSHQQLFESAPLGKKVKKRPEADIGSPDAGSFDVPVAEVGVADLELDLKPQKKTFTLITPTIHTDFSFSIIHLLSAVRLALITPNTEDSLEVGKPNENTGVRTEEGSVHEHTNGSLPNLDVNNPVHPEQTNIPPFTVQDIVNRVRSNPGDPCILETQEPLQDLVRGVLKIFSSKTAPLGAKGWKPLICYEKSTKSWSWTGPLPQSSTEYETFEEVTSPDAWGIPHKMLVKLVDSFANWLKSGQETLRQIGSLPPPPLELMQVNVDEKERFRDLRAQKSLSTISQSPEEVRAYFRKEEQLRYSVPDRAFSYTAADGKKSIVAPLRRCGGKPTSKARDHFLLKRDRPPHVTILCLVRDAAARLPGSIGTRADVCTLIRDSQYVVEDVTDTQVNSVVSGALDRLHYERDPCVQFDGERKLWVYLHRDREEEDFEDDGTSSTKKWKRQKKDASEQDDQVTVACHGTGEASGFDMGSDLNVEPSCANNDKMLDVVCDDTRQRTEDGVKASDMPDEGTFQQMLGSKLQCQENSANEDFGDDT*

Click here to download the sequence:
Link to NCBI Protein BLAST