Transcript Information: S_Transcript_404079.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.17508553444198
Replicate 20
Replicate 30.12133379002369
Condition 2: 8 Hour
Replicate 10
Replicate 20.29436642947009
Replicate 30.98165087654519
Condition 3: 24 Hour
Replicate 10
Replicate 20.1491040235286
Replicate 30.33186900533047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_404079.p1 GENE.S_Transcript_404079~~S_Transcript_404079.p1 ORF type:internal len:152 (+),score=20.26,zf-RVT|PF13966.2|7.4e-20 S_Transcript_404079:1-453(+)
TCTGATGTGGAGGATAGGCGGACTTGGAGAGCGGATTCTTCAGGTTCTTCCTTTCCCATTGCTAGGCTTCTGTGGAAGGCAAAAGTCCCTCTCAAGGTGAGGGCTTTTGTTTGGACCCTGGCCTTAGGTAAGATCAACACCAATGACATGCGGCAACGTAGACGGCCTCAGTGGAGTCTTTCGCCCGATATGTGTCTCATGTGTCATAGGAGTGGGGAGACAGCTTCTCACCTTTTTCTCCATTGTCCTGTTGCACGTTCTGTGTGGATTAAGCTCTTTGAGGTCCGGGGGGAAGCCTTAGTTTGTCCGTCGACTGTTTTGGAGTTCCTGGGAGTCTGCTTTTTGGGGTTTGGTAGGGATAAGGAGTTGGGTGTGTTATGGCATAATGCAATCTTTGCTACTCTGTGGTGTATTTGGTTGGAGCGCATGCCAGGACCACATTGCTATATCTTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_404079.p1 GENE.S_Transcript_404079~~S_Transcript_404079.p1 ORF type:internal len:152 (+),score=20.26,zf-RVT|PF13966.2|7.4e-20 S_Transcript_404079:1-453(+)
SDVEDRRTWRADSSGSSFPIARLLWKAKVPLKVRAFVWTLALGKINTNDMRQRRRPQWSLSPDMCLMCHRSGETASHLFLHCPVARSVWIKLFEVRGEALVCPSTVLEFLGVCFLGFGRDKELGVLWHNAIFATLWCIWLERMPGPHCYIF

Click here to download the sequence:
Link to NCBI Protein BLAST