Transcript Information: S_Transcript_404245.p1


Annotated TAIR IDAT3G25720.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9380234-9381405 | Forward length=282
E-Value2E-07
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.21994215896843
Replicate 20.72934841512446
Replicate 30.45725791942811
Condition 2: 8 Hour
Replicate 11.7624289518292
Replicate 20.55467393321636
Replicate 31.0569841787594
Condition 3: 24 Hour
Replicate 10.90268113597497
Replicate 21.1238253674222
Replicate 30.41689329595233


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_404245.p1 GENE.S_Transcript_404245~~S_Transcript_404245.p1 ORF type:5prime_partial len:121 (+),score=20.04 S_Transcript_404245:2-364(+)
TTCTTCGCTTGGAGGAAAGTTTGTCAAGATAAAAAGTATGGGGGATTTCAGATTAAAGAAGTTTTGAGCTGGAATAAGAGCCTTCTATTTAAATGGGTAGTCAAGGTGCATAGCAGACATGATTCTTTGTGGAGAGACTGGGTAGAGGCCTATTACATCAAAGGGGGAAGTATTTGGGAGATCAAGGCAAAACAGGGTGATTCTTGGGCCTGGAAGAGTATACTGAAGACAAGAGATGACTTTATTAGTATAACAGGTGGAGGGCAGCAAGCCATCACTACTATTCAGAGATGGAAACCTGCAGAATCAATTACTAAGTATGCTTACAACATTTTCAGAGGCATGCAACAGCAGGTTCACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_404245.p1 GENE.S_Transcript_404245~~S_Transcript_404245.p1 ORF type:5prime_partial len:121 (+),score=20.04 S_Transcript_404245:2-364(+)
FFAWRKVCQDKKYGGFQIKEVLSWNKSLLFKWVVKVHSRHDSLWRDWVEAYYIKGGSIWEIKAKQGDSWAWKSILKTRDDFISITGGGQQAITTIQRWKPAESITKYAYNIFRGMQQQVH*

Click here to download the sequence:
Link to NCBI Protein BLAST