Transcript Information: S_Transcript_404379.p2


Annotated TAIR IDAT4G10340.1
Annotated Gene Namelight harvesting complex of photosystem II 5
Annotated Gene Symbol(s)LHCB5
Annotation TypeOrtholog
Chromosome Positionchr4:6408200-6409496 | Forward length=280
E-Value7.2E-34
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70034213776791
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.5964160941144
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_404379.p2 GENE.S_Transcript_404379~~S_Transcript_404379.p2 ORF type:internal len:114 (+),score=4.50,Chloroa_b-bind|PF00504.17|1.2e-18 S_Transcript_404379:3-341(+)
AAGGCACCGCAGCCTGTGAAGAAGGCGGCCAGCCAGGCATCGTCTGCAGCGAACCGCGCTGGCCGGAGCGTTCAGAGGGCGACCAAGGGCTGGGTCGGAGGCGCAGGTGGCCCTCAGGACCTCGACAAGTGGTATGGCCCCAGCCGCAACCTCTTCCTGCCCGACGGCCTGCTCGACCGCAACGACGTGCCAGACTACCTCAACGGCGAGCTCGCCGGCGATTACGGCTACGACCCACTTGGCCTTGGCGTGGATGGCAAGGTTGAGCAGTACCGCACTGCAGAGCTCATCCATGCACGCTGGGCCATGCTTGCCGCGGCAGGCATCATCATTCCCGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_404379.p2 GENE.S_Transcript_404379~~S_Transcript_404379.p2 ORF type:internal len:114 (+),score=4.50,Chloroa_b-bind|PF00504.17|1.2e-18 S_Transcript_404379:3-341(+)
KAPQPVKKAASQASSAANRAGRSVQRATKGWVGGAGGPQDLDKWYGPSRNLFLPDGLLDRNDVPDYLNGELAGDYGYDPLGLGVDGKVEQYRTAELIHARWAMLAAAGIIIPE

Click here to download the sequence:
Link to NCBI Protein BLAST