Transcript Information: S_Transcript_40444.p1


Annotated TAIR IDAT2G17550.1
Annotated Gene Nameunknown protein; Has 264 Blast hits to 258 proteins in 65 species: Archae - 5; Bacteria - 5; Metazoa - 66; Fungi - 16; Plants - 107; Viruses - 0; Other Eukaryotes - 65 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:7634495-7637212 | Reverse length=779
E-Value6.5E-115
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.968864776636
Replicate 28.5010296487148
Replicate 37.3354159338163
Condition 2: 8 Hour
Replicate 117.301277116047
Replicate 217.391900411448
Replicate 316.859992455917
Condition 3: 24 Hour
Replicate 19.5278248896829
Replicate 28.6557834042999
Replicate 37.8943574013753


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40444.p1 GENE.S_Transcript_40444~~S_Transcript_40444.p1 ORF type:complete len:885 (+),score=169.04,DUF4378|PF14309.2|2.1e+03,DUF4378|PF14309.2|4.4e+03,DUF4378|PF14309.2|6.2e-27 S_Transcript_40444:623-3277(+)
ATGGGAGGCTTATCACATTTTTTTGATTTTCATCAAGGGCATATAGGGAGAAAGCACAAGAAACAAGTTGGTGCAGGTCTAGATGCGCCCCGAAATAGTGTTGAATTACCAGCTGAAACTTGGCATAGTCATTATGCTGTTGGGGAGATAGAACAGGATCTACCGAAGAAGAGCTACTATCCAACTGATGCCTCAGTGAAGAAGTTGATCAGCAGGGAAATCTCAAGACGAAACAACAAGCAGACTGCACCGAGCATTGTTGCCAAACTGATGGGGATGGACATGTCGCCAGTTGATACAAAGCCTGAAGCTCAACCTCTCAGTGGAAGAACTGACAAGATGAGAATAACTACTGACAAAATGATTCAAAGTACAGAAAAGGTATCAGCTCCAAGTGCCCCCAAAAAGTCAAAATCGAGCAAAAGTCGTTCTCATAAAGATGCATATTTCCGATACTGGAGCAGTGGCACAAATTCGGGAAGGCCTAGACCTCGAGTACATCCTCAAGAGAAAGAGCTGCAGAAATTCAAGAAAGAATTCGAAGCATGGCAAGCAGCCAGGTTTCTCGAATGTGCTAGGTTGTTAGAACTTGGAAACATTCCTGAGCAGTGGCTTGCTCAGTTAGACCTTACCAAAGAAAAGATGGCTCTATACGAAACTTCTCGAAAAGAAGTAGTTGAAAAATCAATGGACTGTAAAAGTGACATTTCAAGGTCGAGGTCTCTCTGCGGAAGTGATTTCCAGCATCCTTTCTACAAGAAGGAAGTATTCGTTGATGAGCAAAAAGAATCGTACTCTTTCAGGGATAAAAGCTCAAGAAGAGATTTCAAGCAGCTCTCTATAAAGGAATCTGATCAGAACTCCGATAAATGTTCTGCCCCCACAAGGATAGTAATTTTGAAGCCTGGTCCTGATAGCTTTACCACCAATGATGAGTCTTGGGTGAGTTCTTCGTGTTCTGTGGAAGACAGAGATTGCATAGAAGATCTTCTTGAGGAAGTCAAGGAAAGATTGAAATTCGAAATGCAAGGTAAAACATTGAAAAAAGGTTCATTGGTCCGAGGAGGTGGGATTGAGACTCCTTTTAAGGAAAAACCCGCACATACAAAACAAGCCCATCAACCTGTTGCTAAACAGGTAAGAGAACATGTCGGAAGGAGGTTGCTTCGGTCGGAATCAGCAAGATCTTATCAAAGTGAAATCCAGTTTAACGAGCTAGCACCATCCTCGCCCGACTTAATGAGCAGGGATGCAAGGAAATTCCTGTCAGAGAGGCTGAGAAATGTTCTGATTGGAGATGATCAGAGCAGCATTTCAAACCTTTCTGACGAATATCGAAGTGCACCCTTATATGATGACGCTAGGACAAGATTAGAAAAGGCTAGGGATATTCTGTATGCTGAAACTGGAAGGAAGTTTAGTCATCATGATAATATGAACTATGAAGCAGATGAACAATCGAGATCCTTCAGGCATGAAATGGAAGATAATCGAATTTTTCCTGAGCAACCGTCTCCTAGAAACCTAGTTCGTTCTTTGTCTGCTCCAGTGTCAGGAACTTCATTTGGCAAGCTTCTTCTGGAGGACCGATACGTTTCATCTGGGGCTCAAATTAAGAGAAAGCACGAGGCTCTTGGAAATTTACCAGTAGATCCCCAAGGCGAGAGGAGAGAAAGGTTTAATTTCCGAGAGAAGGTTTCCAATATCAAATATAGTTTATCTCTTAGGAAGAAGTTGTTCAGCAGGAAACTCCAGTCAGTTGATTTGCCACATAATAACGAGTTTGATTCAATGAAAGATATAATGAGCGGACCAACTATTCTGGCAAGATTCAGCGACAGGAATGAGAACTTAACTGAGGTGCCACCTAGCCCTGCATCTGTATGCAGCACCCCATGTGAAGAATTCTGGAAGCCAACAGATCATCCCAGCCCAATATCAGCTTCTGATGTGACTTCTGTAGGAGATCATAGTGTTGGCAATGTTTTCAGAGAGATCAGCTCTAATCTTACTGAGTTGCGAAAGCAATTGAACCAACTCGAGTACGAAGGATCAGAGATCACAACTGTCACTGAGGATCCTTCTGAACCAGAGGTAATTGACTTGGAAGATGAAGCAGAAGTCTACATCAGGGACCTCCTCGCCACTTCAGGTTTATATGATGGATCATGGGATAAATCTTTCTCAAGATGGGATCCATACGTGAAGCCATTGAGCAACTGGGTATTTGAAAAGGTGGAAGAATCCTACCAAAAACCAACCAATGAAAATGAAGAACTCTCCAAGAGTTGCGACAGAACAAATTTAGACCACAAGTTGTTATTTGATCTATCTAACGAGGCACTCACGGTTGTACTTGGGCCACCCCGAACCTTGTGTAAGTTCAGGAGAAGGATAACCGATATCAACATGTTGCCCCGGCCTCAAGGCAGAAAGCTATTGGACCGGGTGTGGGAGATGATACAGCAGTATGTATACCCAACAATGGACCCCCAGACTGTCTCTTCTTCACTCGATGATTTGGTGGCTCGTGAATTGGACATAATGCCATGGTCTGATCTAATAGACGAAGACATGAGAGTTCTAGGTAAAGAGCTCGAAAACCTGATTACAAGTGAACTTGTAGAAGAACTTGCGATGGAAATGCAGCTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40444.p1 GENE.S_Transcript_40444~~S_Transcript_40444.p1 ORF type:complete len:885 (+),score=169.04,DUF4378|PF14309.2|2.1e+03,DUF4378|PF14309.2|4.4e+03,DUF4378|PF14309.2|6.2e-27 S_Transcript_40444:623-3277(+)
MGGLSHFFDFHQGHIGRKHKKQVGAGLDAPRNSVELPAETWHSHYAVGEIEQDLPKKSYYPTDASVKKLISREISRRNNKQTAPSIVAKLMGMDMSPVDTKPEAQPLSGRTDKMRITTDKMIQSTEKVSAPSAPKKSKSSKSRSHKDAYFRYWSSGTNSGRPRPRVHPQEKELQKFKKEFEAWQAARFLECARLLELGNIPEQWLAQLDLTKEKMALYETSRKEVVEKSMDCKSDISRSRSLCGSDFQHPFYKKEVFVDEQKESYSFRDKSSRRDFKQLSIKESDQNSDKCSAPTRIVILKPGPDSFTTNDESWVSSSCSVEDRDCIEDLLEEVKERLKFEMQGKTLKKGSLVRGGGIETPFKEKPAHTKQAHQPVAKQVREHVGRRLLRSESARSYQSEIQFNELAPSSPDLMSRDARKFLSERLRNVLIGDDQSSISNLSDEYRSAPLYDDARTRLEKARDILYAETGRKFSHHDNMNYEADEQSRSFRHEMEDNRIFPEQPSPRNLVRSLSAPVSGTSFGKLLLEDRYVSSGAQIKRKHEALGNLPVDPQGERRERFNFREKVSNIKYSLSLRKKLFSRKLQSVDLPHNNEFDSMKDIMSGPTILARFSDRNENLTEVPPSPASVCSTPCEEFWKPTDHPSPISASDVTSVGDHSVGNVFREISSNLTELRKQLNQLEYEGSEITTVTEDPSEPEVIDLEDEAEVYIRDLLATSGLYDGSWDKSFSRWDPYVKPLSNWVFEKVEESYQKPTNENEELSKSCDRTNLDHKLLFDLSNEALTVVLGPPRTLCKFRRRITDINMLPRPQGRKLLDRVWEMIQQYVYPTMDPQTVSSSLDDLVARELDIMPWSDLIDEDMRVLGKELENLITSELVEELAMEMQL*

Click here to download the sequence:
Link to NCBI Protein BLAST