Transcript Information: S_Transcript_404638.p1


Annotated TAIR IDAT1G30240.2
Annotated Gene Nameunknown protein; Has 169 Blast hits to 168 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 49; Fungi - 68; Plants - 46; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:10641241-10645838 | Reverse length=827
E-Value3E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.49743927542393
Replicate 20.61858288479014
Replicate 30.51708605841871
Condition 2: 8 Hour
Replicate 10.39860542648847
Replicate 20.20908269756754
Replicate 30.19921352901852
Condition 3: 24 Hour
Replicate 10
Replicate 20.42362264628687
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_404638.p1 GENE.S_Transcript_404638~~S_Transcript_404638.p1 ORF type:internal len:107 (+),score=15.64,RIX1|PF08167.8|5.9e-23 S_Transcript_404638:2-319(+)
CTCTCTGAAGAAATTCCCAATTTTTCCGACCATAAGCACGCTTCTTCTTGGTCCTCCGCCATCGACGCTTGGGTCGACCGAACTCTGTTGCTCGTTAAATCCAATTTGCCAGATAGATGTTGGGCTGGGGTTTGCTTGCTAGGAGTTACTTGCACGGAATGCAGCTCTCAACGTTTATTGGCTTCTTATTCGGATTGGATTAATGTGCTCCTTTCCCATATTCAGCCATCTGGAGCTTCAAAGCTTGTGAAGGTAGCTTCTTGTGCTGCTATATCCGATTTGTTGACCAGGCTTGGTGGCTTCTCAAACATAAAGAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_404638.p1 GENE.S_Transcript_404638~~S_Transcript_404638.p1 ORF type:internal len:107 (+),score=15.64,RIX1|PF08167.8|5.9e-23 S_Transcript_404638:2-319(+)
LSEEIPNFSDHKHASSWSSAIDAWVDRTLLLVKSNLPDRCWAGVCLLGVTCTECSSQRLLASYSDWINVLLSHIQPSGASKLVKVASCAAISDLLTRLGGFSNIKK

Click here to download the sequence:
Link to NCBI Protein BLAST