Transcript Information: S_Transcript_40466.p1


Annotated TAIR IDAT2G22125.1
Annotated Gene Namebinding
Annotated Gene Symbol(s)CSI1
Annotation TypeOrtholog
Chromosome Positionchr2:9406793-9414223 | Forward length=2150
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 120.37419495418
Replicate 224.48623434486
Replicate 323.476559436899
Condition 2: 8 Hour
Replicate 121.082019243614
Replicate 220.127217130938
Replicate 322.522022528896
Condition 3: 24 Hour
Replicate 120.411410394207
Replicate 219.732495956392
Replicate 319.357289429319


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_40466.p1 GENE.S_Transcript_40466~~S_Transcript_40466.p1 ORF type:complete len:2103 (+),score=559.09,Arm|PF00514.19|0.00012,Arm|PF00514.19|0.39,Arm|PF00514.19|3.9e+03,Arm|PF00514.19|0.044,Arm|PF00514.19|2.5,Arm|PF00514.19|58,Arm|PF00514.19|2.5e+02,Arm|PF00514.19|3.7e-05,Arm|PF00514.19|0.29,Arm|PF00514.19|1.9e+02,Arm|PF00514.19|2.9e+03,Arm|PF00514.19|0.23,Arm|PF00514.19|2.1e+02,Arm|PF00514.19|1.2e+04,Arm|PF00514.19|6.5e+03,Arm|PF00514.19|2.4e+03,Arm|PF00514.19|3e+02,Arm|PF00514.19|56,Arm|PF00514.19|5.9e+02,Arm|PF00514.19|2.4e+03,Arm|PF00514.19|90,Arm|PF00514.19|1.7e+02,Arm|PF00514.19|3.5,Arm|PF00514.19|1.9e+02,Arm|PF00514.19|3.9e+03,Arm|PF00514.19|1,Arm|PF00514.19|3.6e+03,Arm|PF00514.19|8.5,Arm|PF00514.19|2,Arm|PF00514.19|0.23,Arm|PF00514.19|0.026,Arm|PF00514.19|2.2,HEAT_2|PF13646.2|0.0005,HEAT_2|PF13646.2|0.013,HEAT_2|PF13646.2|79,HEAT_2|PF13646.2|0.00096,HEAT_2|PF13646.2|1.3e+02,HEAT_2|PF13646.2|6.6e+02,HEAT_2|PF13646.2|12,HEAT_2|PF13646.2|1.1e+04,HEAT_2|PF13646.2|0.014,HEAT_2|PF13646.2|2.7,HEAT_2|PF13646.2|1.2,HEAT_2|PF13646.2|0.0024,HEAT_2|PF13646.2|1.7e+02,HEAT_2|PF13646.2|1.4,HEAT_2|PF13646.2|3.1,C2|PF00168.26|1.5e-11 S_Transcript_40466:448-6756(+)
ATGTCATTAAGAGACCGCACTACCAGTATGGAGGACCCAGATGGAACATTAGCAAGTGTTGCCCAATGCATTGAGCAGTTGAGGCAGAATTCTTCCTCAGTACAAGAGAAAGAGTATTCCCTACGGCAGTTGCTAGAACTTATAGAGACCCGTGAAAATGCTTTGAGCGCTGTAGGCTCTCATTCACAGGCAGTCCCAGTGCTTGTTTCACTATTGAGGTCAGGGTCACTGATGGTCAAAATACAAGCTGCTCGTGTTTTAGGGTCTCTCTGTAAGGAGAATGAACTCAGGGTTAAAGTTCTTCTTGGGGGTTGCATTCCACCTCTGCTTGGTCTACTGAGGTCCAGTTCATCTGATGGGCAGGTTGCTGCTGCAAAGACGTTATTTGCAGTTTCCCAAGGTGATGCAAGAGATCATGTTGGATCAAAAATTTTTTCTACTGAAGGGGTTGTGCCAGTTCTTTGGGGGCAGCTAGAGAGAGGGTTAGATGCTGGGAACTTGGTTGATGAACTACTGACTGGGGCTTTAAGAAATCTTTCTGGAAGCACAGAGGGATTTTGGCCAGCAACAGTCAAATCTGGAGGAGTAGATATACTTGTAAAATTGCTCAAGACTGGACCACCTGGCACACAAGCAAATGTATGCTTTCTTCTTGCTTGCATGATGATGGAGGATACATCTGTCTCTGCCACTGTATTGGCTGGTGATACAGTGAAGCAGCTCCTGAAGTTGTTGGGGCCTGGTAATGAAGCATCTGTCAGAGCTGAAGCTGCCGGTGCTCTTAAATCTCTTTCTGCCCAGAGCAAAGAGGCACGGAAAGAGATAGCCAGCAATAACGGCATACCAGCTCTAATAAATGCCACAATTGCTCCTTCAAAAGAATTTATGCAGGGTGAGCATGCTCAAGCATTGCAGGAGAATGCGATGTGTGCTCTAGCAAACATATCTGGTGGGTTGTCATCTGTCATCTCAAGTCTTGGGAAAAGCCTTGAATCTTGCACTTCACCTTCACAGGTTGCTGATACTTTAGGGGCGCTAGCTTCAGCTCTCATGATATATGACGACGAAGCTGAGTCCACGAGAGCGTCAGACCCTCAAATTGTTGAGCAGACACTGCTTAAGCAGTTCAAGCCCCAATTACCATTTCTGATCCAGGAGCGGACCATAGAGGCACTTGCTAGCTTGTATGGGAACAGTGTACTCTCAAGAAAGCTCACAAATTCTGATGCAAAACGCTTGCTGGTTGGTTTGATCACAATGGCTTCAAATGAAGTTCAGGATGAGCTGATAAAGTCCCTTCTGAAGATTTGTGATGATGAAGACAGTCTGTGGCGTGCACTTCAGGGGCGTGATGGTGTTCAACTATTAATATCACTTCTGGGGTTGTCATCAGAGCAGCAACAGGAATGTGCTGTTGCATTGCTTTCCCTCCTATCAAATGAGAATGATGAGAGTAAATGGGCTATTACTGCGGCTGGTGGAATACCACCTCTGGTCCAGATTCTCGAGACTGGGTCTTCAAAAGCTAAAGAAGACTCTGCTACTATTTTAGGGAACTTGTGTAATCATAGTGAAGACATAAGAGCATGTGTTGAAAGTGCTGATGCTGTTCCTGCTCTTTTGTGGCTATTAAAGAATGGAAGCTCAAATGGGAAAGAGATTGCAGCCAAAACTCTGAATCATCTAATTCATAAACCTGATACTGCAACCATCAGCCAACTAACTGCTCTTTTAACTAGTGATCTTCCTGAATCCAAAATTCATGTTTTCGATGCATTGAAAAGTATGTTGTCTGTGGTTCCTCTGAATGATATACTGCGGGAGGGTAGTGCAGCAAATGATGCAATTGAGACAATGATTAAAATATTGAGTTCCACAAAGGAGGAAACCCAGGCAAAGTCTGCCTCCACTCTGGCTGGGATCTTTTATTTGAGGAAGGACTTGCGGGAAAGCAGCATTGCTGTTAAGATTCTCTGGTCTGTCATAAAGCTCCTCAATTCAGAATCAGAAAGCATCCTCGTAGCAACGTCATCTTTTCTTTCTGCTATTTTTCTTTCTGTGAGGGAAAATGCTGATGTATGTTCTGTTGCCAGAGATGTTTTGCCTCGGCTAATTGTTCTGGCGAATTCTTCTGTTCTTGATGTTGCTGAGCAGGCAACGTGCGCGGTAGCCAACCTCCTATTGGATGATGAAATCTCAGAAAGAGCTTTACCTGCAGAAATTATTTTGCCTGCCACCAGGGTGTTGTGTGATGGCACACTTTCTGGAAAGACCCATGCTGCTGCTGCTATTGCTCGCTTTCTGCGTCGACGTCGAATAGATGAATCTCTAAGTGATTGCGTGCATCGTGCTGGTACAGTATTGTCTTTAGTTTCTTTCTTGGAGTTAGCTAATGATGGCTCTGTTGCCACAACAGAAGCACTAGATGCACTGGGGTATCTGTCAAGGTCAGGAGTTCCTGGTGAGAAAATCAGACCTGCATGGAAAGTTCTAGCAGAATCTCCAAGCCGCATTATTCCAATAGTTTCCTCCATAGCTGGTGCAGCACCAGCTTTGCAAGATAAAGCTATCAAAATATTGTCTAGAGTTTGCCATGAGCAGCTAATTGTATTAGGGGAAATTGTTTGTAATTCCTCTGGATGTATTGCATCAATTTCTAGAAGAGTTATTAGTTCTAGGGACACAGATGTTAGGATTGGAGGTAGTGCACTTCTTTCATGTGCAGCCAGAGTTAGTCATCAGAAAATGTTGGAGGATCTACAGGACTCAAATCTATGTGCCTATCTCATTCAGGCTCTGGTGGAAGTGCTTACTTCCTCTCCAACATCATCAGAGGACCAGGAGGCTGTTGAGGAGGAGGCAGTAAGCATTCACTTGCACTGGGGCACTGAAGAGGCAGGGAGTACTGAAGCAATCACAAGGGTTGTACGCGGGACCAATATTGCTGTGTGGCTGTTGTCTGTTCTTGCTTCTCATGATGAGAAAAGTAAAGTTGTTTTAATGGATGCTGGAGCAGTTGAAGTTCTCACTGACAAGATTTCAAAATCTCAGATTGACTACAGTGAAGATAGTAGCATATGGATTTACGCTTTACTGCTGGCTGTTCTGTTCCAAGATAGAGAAATCATTCGAGCAAATGAAACCATGAAATCCATTCCTGTTCTTGCAAATTTATTGAGGTCAGAGGAGACTGCCAACAGATATTTTGCAGCACAAGCCCTGGCCAGTCTGGTCTGCAATGGTAGCAGGGGAACTCTTTTATCCGTGGCCAATTCTGGCACAGCTGGTGGCCTTATTACTTTACTTGGCTGTGCTGATGAAGATATATATGATCTTTTGAAATTGTCTGAGGAGTTCTGTTTGGTTCGCTATCCTGACCAAGTGGCTCTCGAGAGGTTGTTCAGGGTTGATGATATTAGGACTGGTGCAACTTCTCGGAAAGCAATACCTGCCCTTGTTGATCTTCTTAAACCTATTCCTGACCGTCCAGGAGCTCCATTCTTGGCACTTGGTCTCCTGACCCAACTTGCAAATGATAGTCCTTCCAATAAGATGCTGATGGTAGAGTCTGGAGCACTTGAGGCGGTAACCAAGTATCTCTCACTTAGTCCCCAAGATGCAACAGAGGAAGCAGCCACTGATTTGTTGGGACTCCTGTTCAGTAGTCCTGAAATTTGCAGGCATGAAGCTGCATTTGGTGCTGTGACTCAGCTTGTAGCAGTCTTACGTCTAGGTGGAAGAGCTGCAAGGTTTAGTGCAGCCAAAGCATTGGAAAGTTTATTTTCTGCAGACCATGTAAGGAATGCAGAAACTGCTCGTCAGGCTGTGCAGCCGTTGGTGGAGGTTCTTAGTACAGGCATGGAGAGAGAGCAGCATGCTGCAATTGCAGCATTGATCAGGCTGCTAAGTGAGAATCCTTCAAGAGCTCTAGCTGTCCCAGATGTTGAAATGAATGCAGTGGATGTTCTCTGCAAGATCCTCTCATCAAACTCTTCAATGGAGCTGAAAGGTGATGCTGCAGAGCTATGCTCTGTACTCTTCACAAACTCTAAAATCAGGGGTACTGCAGCAGCAGCTCGTTGTGTTGAGCCACTGGTCTCTCTCCTTGTTACGGAGTTTACACCTGCTCAGCATTCAGTTGTCCGTGCTCTGGATAAACTATTGGATGATGAGCAATTAGCTGAGTTAGTTTCAGCCCATGGTGCAGTTATTCCACTTGTTGGCCTTCTATACAGCAGGAATTACTTGCTTCATGAGGCTGTTTCAAGAGCTCTGGTGAAGTTGGGAAAAGACAGGCCTTCTTGCAAGATGGAAATGGTGAAAGCTGGTGTAATTGAATGCATACTTGATATACTACATGAAGCACCTGATTTTCTCTCTGCTGGTTTTGCAGAGTTGCTCCGAATATTGACAAATAATGCCACAATTGCTAAAGGGCCATCAGCGGCTAAAGTTGTTGAGCCTTTCTTCATGTTGTTATCACGATCAGACTTTGGCCCTGATGGACAGCACAGTGCTTTGCAGGTTCTAGTTAATATTTTAGAGCATCCACAGTGTCGTGCCGACTACACTTTAACGTCACACCAGGCGATTGAACCTCTCATACCTTTATTAGACTCTCATGTTCCAGCTGTACAGCAGCTGGCTGCAGAGCTTTTATCCCATCTGTTGTTGGAGGAGAACCTGCAGAAGGATCCCTTGACGCAACAAGTTATTGGTCCACTTGTAAGAGCTCTTGGATCAGGTATACACATTCTACAGCAGAGAGCTATAAAGGCCCTTGTTAGTATTGCACTTATATGGCCAAATGAGATTGCAAAAGAGGGTGGTGTTAATGAGCTATCTAAGGTTATATTACAAGCTGATCCTTCGCTTCCCCATGCTCTGTGGGAATCGGCAGCTTCTGTTTTGGCTTGCATTTTGCAATTTAGTTCTGAATTTTATTTGGAAGTGCCAATTGCTGTGCTCGTTAGATTGCTTCACTCTGGTTCAGAAAGTACTGTAGTTGGAGCATTGAATGCTCTTCTGGTGTTGGAAAGTGATGATTCAACCAGTGCTGAAGCAATGGCCGAAAGTGGTGCAATTGAGGCCCTTTTGGAGCTTCTTAGATGTCACCAGTGTGAGGATACTTCTGCAAGATTGCTTGAAGTATTGCTTAACAATGTAAAAATCAGAGAATCCAAAGCTAGCAGGGCCGCAATCTTACCATTGTCTCAGTACCTTCTGGACCCACAGACACAAGGGCAACAGGCAAGATTGCTGGCTACCCTGGCTTTGGGTGATCTATTCCAGAATGAGGCCCTTGCTCGAAGCAACGATGCTGTTTCAGCTTGTCGTGCCTTGGTTAATTTGCTTGAAGACCAGCCCACTGAGGAAATGAAAGTGGTTGCTATTTGTGCTCTGCAAAACCTTGTGATGTACAGTCGATCAAATAAAAGAGCAGTTGCTGAAGCTGGTGGAGTTCAGGTCATACTTGATCTAATTGGTTCAAGTGATCCTGAAACTTCAATTCAGGCAGCGATGTTCATTAAACTTCTGTTCTCCAACAATACAATTCAGGAGTATGCTTCCAGTGAGACTGTCAGGGCCATAACTGCTTCTATTGAAAAGGATTTGTGGGCAAGTGGAACCGTAAACGAGGAGTATTTGAAAGCCCTGAATGCGCTTTTTGGCAACTTCCCACGTTTAAGAGCCACTGAACCTGCTACTCTCAGTATACCCCACCTTGTGACCTCTCTCAAAACAGGCTCAGAAGCAACTCAAGAAGCTGCCTTGGATGCACTGTTTCTCCTCAGACAGGCTTGGTCTGCATGCCCTGCTGAAGTCTCCCGTGCTCAATCAATAGCTGCTGCTGATGCAATTCCATTGCTGCAGTACTTAATCCAATCTGGCCCACCTCGTTTCCAAGAGAAGGCCGAGTTTTTGTTGCAGTGCTTGCCAGGAACTCTGACTGTAATAATCAAGCGTGGAAACAATATGAGGCAATCAGTGGGAAACCCAAGTGTATATTGTAAGCTTACACTTGGAAATACACCACTGAGACAAACAAAGGTTGTGTCTACTGGTCCTACCCCGGAGTGGGATGAAAGTTTTACATGGTCCTTTGAGAGTCCTCCAAAGGGCCAAAAATTGCACATATCTTGCAAGAACAAGAGCAAAGTGGGAAAGAGTTCATTCGGTAAGGTGACAATCCAGATTGATCGAGTAGTGATGCTGGGAGCGGTTGCTGGAGAGTACACACTGCTTCCCGAGAGTAAGAGTGGACCCTCAAGAAATTTGGAAATCGAATTTCAATGGTCTAACAAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_40466.p1 GENE.S_Transcript_40466~~S_Transcript_40466.p1 ORF type:complete len:2103 (+),score=559.09,Arm|PF00514.19|0.00012,Arm|PF00514.19|0.39,Arm|PF00514.19|3.9e+03,Arm|PF00514.19|0.044,Arm|PF00514.19|2.5,Arm|PF00514.19|58,Arm|PF00514.19|2.5e+02,Arm|PF00514.19|3.7e-05,Arm|PF00514.19|0.29,Arm|PF00514.19|1.9e+02,Arm|PF00514.19|2.9e+03,Arm|PF00514.19|0.23,Arm|PF00514.19|2.1e+02,Arm|PF00514.19|1.2e+04,Arm|PF00514.19|6.5e+03,Arm|PF00514.19|2.4e+03,Arm|PF00514.19|3e+02,Arm|PF00514.19|56,Arm|PF00514.19|5.9e+02,Arm|PF00514.19|2.4e+03,Arm|PF00514.19|90,Arm|PF00514.19|1.7e+02,Arm|PF00514.19|3.5,Arm|PF00514.19|1.9e+02,Arm|PF00514.19|3.9e+03,Arm|PF00514.19|1,Arm|PF00514.19|3.6e+03,Arm|PF00514.19|8.5,Arm|PF00514.19|2,Arm|PF00514.19|0.23,Arm|PF00514.19|0.026,Arm|PF00514.19|2.2,HEAT_2|PF13646.2|0.0005,HEAT_2|PF13646.2|0.013,HEAT_2|PF13646.2|79,HEAT_2|PF13646.2|0.00096,HEAT_2|PF13646.2|1.3e+02,HEAT_2|PF13646.2|6.6e+02,HEAT_2|PF13646.2|12,HEAT_2|PF13646.2|1.1e+04,HEAT_2|PF13646.2|0.014,HEAT_2|PF13646.2|2.7,HEAT_2|PF13646.2|1.2,HEAT_2|PF13646.2|0.0024,HEAT_2|PF13646.2|1.7e+02,HEAT_2|PF13646.2|1.4,HEAT_2|PF13646.2|3.1,C2|PF00168.26|1.5e-11 S_Transcript_40466:448-6756(+)
MSLRDRTTSMEDPDGTLASVAQCIEQLRQNSSSVQEKEYSLRQLLELIETRENALSAVGSHSQAVPVLVSLLRSGSLMVKIQAARVLGSLCKENELRVKVLLGGCIPPLLGLLRSSSSDGQVAAAKTLFAVSQGDARDHVGSKIFSTEGVVPVLWGQLERGLDAGNLVDELLTGALRNLSGSTEGFWPATVKSGGVDILVKLLKTGPPGTQANVCFLLACMMMEDTSVSATVLAGDTVKQLLKLLGPGNEASVRAEAAGALKSLSAQSKEARKEIASNNGIPALINATIAPSKEFMQGEHAQALQENAMCALANISGGLSSVISSLGKSLESCTSPSQVADTLGALASALMIYDDEAESTRASDPQIVEQTLLKQFKPQLPFLIQERTIEALASLYGNSVLSRKLTNSDAKRLLVGLITMASNEVQDELIKSLLKICDDEDSLWRALQGRDGVQLLISLLGLSSEQQQECAVALLSLLSNENDESKWAITAAGGIPPLVQILETGSSKAKEDSATILGNLCNHSEDIRACVESADAVPALLWLLKNGSSNGKEIAAKTLNHLIHKPDTATISQLTALLTSDLPESKIHVFDALKSMLSVVPLNDILREGSAANDAIETMIKILSSTKEETQAKSASTLAGIFYLRKDLRESSIAVKILWSVIKLLNSESESILVATSSFLSAIFLSVRENADVCSVARDVLPRLIVLANSSVLDVAEQATCAVANLLLDDEISERALPAEIILPATRVLCDGTLSGKTHAAAAIARFLRRRRIDESLSDCVHRAGTVLSLVSFLELANDGSVATTEALDALGYLSRSGVPGEKIRPAWKVLAESPSRIIPIVSSIAGAAPALQDKAIKILSRVCHEQLIVLGEIVCNSSGCIASISRRVISSRDTDVRIGGSALLSCAARVSHQKMLEDLQDSNLCAYLIQALVEVLTSSPTSSEDQEAVEEEAVSIHLHWGTEEAGSTEAITRVVRGTNIAVWLLSVLASHDEKSKVVLMDAGAVEVLTDKISKSQIDYSEDSSIWIYALLLAVLFQDREIIRANETMKSIPVLANLLRSEETANRYFAAQALASLVCNGSRGTLLSVANSGTAGGLITLLGCADEDIYDLLKLSEEFCLVRYPDQVALERLFRVDDIRTGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLANDSPSNKMLMVESGALEAVTKYLSLSPQDATEEAATDLLGLLFSSPEICRHEAAFGAVTQLVAVLRLGGRAARFSAAKALESLFSADHVRNAETARQAVQPLVEVLSTGMEREQHAAIAALIRLLSENPSRALAVPDVEMNAVDVLCKILSSNSSMELKGDAAELCSVLFTNSKIRGTAAAARCVEPLVSLLVTEFTPAQHSVVRALDKLLDDEQLAELVSAHGAVIPLVGLLYSRNYLLHEAVSRALVKLGKDRPSCKMEMVKAGVIECILDILHEAPDFLSAGFAELLRILTNNATIAKGPSAAKVVEPFFMLLSRSDFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLIPLLDSHVPAVQQLAAELLSHLLLEENLQKDPLTQQVIGPLVRALGSGIHILQQRAIKALVSIALIWPNEIAKEGGVNELSKVILQADPSLPHALWESAASVLACILQFSSEFYLEVPIAVLVRLLHSGSESTVVGALNALLVLESDDSTSAEAMAESGAIEALLELLRCHQCEDTSARLLEVLLNNVKIRESKASRAAILPLSQYLLDPQTQGQQARLLATLALGDLFQNEALARSNDAVSACRALVNLLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVILDLIGSSDPETSIQAAMFIKLLFSNNTIQEYASSETVRAITASIEKDLWASGTVNEEYLKALNALFGNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWSACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLTVIIKRGNNMRQSVGNPSVYCKLTLGNTPLRQTKVVSTGPTPEWDESFTWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLEIEFQWSNK*

Click here to download the sequence:
Link to NCBI Protein BLAST