Transcript Information: S_Transcript_404813.p1


Annotated TAIR IDAT3G07880.1
Annotated Gene NameImmunoglobulin E-set superfamily protein
Annotated Gene Symbol(s)SCN1
Annotation TypeHomolog
Chromosome Positionchr3:2514175-2515544 | Forward length=240
E-Value2E-45
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.9193803211469
Replicate 24.7655625444232
Replicate 33.6885472167201
Condition 2: 8 Hour
Replicate 18.7007592493903
Replicate 27.3379663538303
Replicate 39.2937095557719
Condition 3: 24 Hour
Replicate 13.6699404264198
Replicate 24.9860385467964
Replicate 35.9524024796074


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_404813.p1 GENE.S_Transcript_404813~~S_Transcript_404813.p1 ORF type:complete len:250 (+),score=57.24,Rho_GDI|PF02115.13|1.9e-52 S_Transcript_404813:255-1004(+)
ATGCCACTTGCTGTTGAAGCTGTTTCTGGTGCTCCTAACATGAAGTTCGAAGAGCAGAAGAGCAGCAAGATAGATAACTTCAACTGCGAATTTAAGGAAAGTGCTGATATTGGTAAGGATTTGATCAAGGAAATCAGCGAAAAACCTGTTGATCATGACAAATTAGCTGAAACGAAAATGCAGGGAGATACTGAAGCCTGCTTGAAGTTTGATGAGCATGTCGAAAAGTATAAGGATTCTGTAATGAATGATGATGAAAGCTTAACCAATTGCAAGCAGCAAGAAGTTCCTGCAAGTATCGACACATCCGCTGTCAGAGAAAGCAAAGGACCAGAGGTGAAGATATTGAGCCTCACAGTTGTTTCTCCTGGCCGTCAAGATGTTGTGTTGCCAATTCCATTTCCTGCAACTACTTCCAAATCCACACTGTTTACCCTCAAGGAAGGAAGCAAATACCGAATCAAGTTTCATTTCACCGTGTCTAACAACACTGTTTCTGACCTCAAATACACCTACATGGTTTGGAAGGCTGGTGTCAGAGTACACCAGACAAAGAAGATGATGGGTGCATTCAGCCCGCGGCAAGAACCCTACATATTCGAACTAGAGGAAGGAACTACTCCTACAGGATTCTTTGCAAGAGGCCCTTTCTTGGTTAAATCTAAGTTTGTGGATGATGAAAACTGTTACTTAGATACCACTTACTACTTTGATATCAGAAAGGACTGGGGAGCTAAAGAAAAGTGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_404813.p1 GENE.S_Transcript_404813~~S_Transcript_404813.p1 ORF type:complete len:250 (+),score=57.24,Rho_GDI|PF02115.13|1.9e-52 S_Transcript_404813:255-1004(+)
MPLAVEAVSGAPNMKFEEQKSSKIDNFNCEFKESADIGKDLIKEISEKPVDHDKLAETKMQGDTEACLKFDEHVEKYKDSVMNDDESLTNCKQQEVPASIDTSAVRESKGPEVKILSLTVVSPGRQDVVLPIPFPATTSKSTLFTLKEGSKYRIKFHFTVSNNTVSDLKYTYMVWKAGVRVHQTKKMMGAFSPRQEPYIFELEEGTTPTGFFARGPFLVKSKFVDDENCYLDTTYYFDIRKDWGAKEKC*

Click here to download the sequence:
Link to NCBI Protein BLAST